Protein–RNA interactions for Protein: Q9JKE1

Trem3, TREM-3, mousemouse

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trem3Q9JKE1 Trav10-201ENSMUST00000103583 406 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm15125-201ENSMUST00000116185 800 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Olfr595-ps1-201ENSMUST00000118180 954 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm5937-201ENSMUST00000119715 643 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm7308-201ENSMUST00000121087 447 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Platr16-202ENSMUST00000150529 545 ntTSL 3 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm23168-201ENSMUST00000157156 143 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm25476-201ENSMUST00000175125 185 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm23268-201ENSMUST00000175494 78 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Ranbp2-ps9-201ENSMUST00000184566 382 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm28647-201ENSMUST00000188416 197 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Npn2-202ENSMUST00000189275 235 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm18551-201ENSMUST00000195594 642 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm43092-201ENSMUST00000202986 1854 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm45427-201ENSMUST00000209572 1253 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm45445-201ENSMUST00000209586 232 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Olfr135-202ENSMUST00000213217 2917 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 AC160123.1-201ENSMUST00000213443 570 ntTSL 5 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm37566-201ENSMUST00000192363 4355 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Gm43889-201ENSMUST00000203950 3681 ntBASIC2.04□□□□□ -2.08
Trem3Q9JKE1 Olfr1487-204ENSMUST00000216688 2038 ntTSL 5 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Olfr837-202ENSMUST00000215699 3758 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm16436-201ENSMUST00000121510 1607 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm22115-201ENSMUST00000103976 133 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm23923-201ENSMUST00000104108 133 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm22019-201ENSMUST00000104359 96 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm22676-201ENSMUST00000116972 129 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm12787-201ENSMUST00000119234 396 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm11881-201ENSMUST00000119408 572 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm9440-201ENSMUST00000119667 539 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm13913-201ENSMUST00000121126 260 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm15669-201ENSMUST00000147834 526 ntTSL 3 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm22225-201ENSMUST00000157358 278 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Nron-204ENSMUST00000158971 370 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Mir7028-201ENSMUST00000185016 64 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm44476-201ENSMUST00000196225 91 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm34648-201ENSMUST00000202460 338 ntTSL 2 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm34314-201ENSMUST00000203622 367 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm44332-201ENSMUST00000203712 433 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm45879-201ENSMUST00000212521 392 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 AC144783.2-201ENSMUST00000219089 195 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 CT030662.1-201ENSMUST00000227380 232 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 A430010J10Rik-201ENSMUST00000054470 408 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Olfr814-202ENSMUST00000213742 3798 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Gm38162-201ENSMUST00000195562 4597 ntBASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Olfr218-202ENSMUST00000215844 3410 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Trem3Q9JKE1 Vmn2r65-201ENSMUST00000044583 2538 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm9496-201ENSMUST00000191295 1601 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 AU041133-201ENSMUST00000105314 1494 ntTSL 5 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm23128-201ENSMUST00000104257 132 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm25539-201ENSMUST00000116886 122 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm12392-201ENSMUST00000118014 938 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm12383-201ENSMUST00000120628 760 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Mup-ps13-201ENSMUST00000120662 545 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm22957-201ENSMUST00000122511 123 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm17187-201ENSMUST00000164622 410 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm24757-201ENSMUST00000176987 371 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Mir8118-201ENSMUST00000183962 129 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm29045-201ENSMUST00000187278 698 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm28744-201ENSMUST00000189939 340 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm9632-201ENSMUST00000195934 643 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm23128-202ENSMUST00000196578 133 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Igkv20-101-2-201ENSMUST00000200406 339 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm42896-201ENSMUST00000201249 1113 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Vmn1r-ps7-201ENSMUST00000202355 928 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Olfr908-201ENSMUST00000215139 932 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm23615-201ENSMUST00000082602 65 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Gm23846-201ENSMUST00000083835 107 ntBASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Trem3Q9JKE1 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Mir667-201ENSMUST00000102441 92 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Olfr1158-201ENSMUST00000102622 942 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm12876-201ENSMUST00000120975 408 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm5929-201ENSMUST00000166883 487 ntBASIC2.01□□□□□ -2.09
Trem3Q9JKE1 Gm20450-201ENSMUST00000173652 147 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 85.1 ms