Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Gm28886-201ENSMUST00000187350 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21599-202ENSMUST00000187381 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28128-201ENSMUST00000187403 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21450-201ENSMUST00000187408 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28689-201ENSMUST00000187441 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28851-201ENSMUST00000187800 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28554-201ENSMUST00000187964 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28984-201ENSMUST00000188202 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21529-202ENSMUST00000188473 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28604-202ENSMUST00000188638 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21588-202ENSMUST00000188721 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21539-202ENSMUST00000188764 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28216-201ENSMUST00000188785 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm29645-201ENSMUST00000189117 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21413-201ENSMUST00000189224 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21723-202ENSMUST00000189444 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm36782-201ENSMUST00000189459 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21419-201ENSMUST00000189495 173 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28566-202ENSMUST00000189532 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21626-202ENSMUST00000189751 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28656-201ENSMUST00000190017 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21562-202ENSMUST00000190314 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28517-201ENSMUST00000190343 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm37681-201ENSMUST00000193880 727 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm38080-201ENSMUST00000194035 268 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 AC122464.1-201ENSMUST00000202789 770 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm44881-201ENSMUST00000205425 367 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 AC156798.1-201ENSMUST00000220508 224 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Cul3-202ENSMUST00000164108 2442 ntTSL 5 BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Gm14308-201ENSMUST00000108990 1628 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Ckap5-204ENSMUST00000111338 6665 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
Trim39Q9ESN2 Vmn2r24-201ENSMUST00000075095 2565 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Olfr613-202ENSMUST00000214173 3840 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Fbxl17-204ENSMUST00000112840 3667 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Zfp266-202ENSMUST00000174462 6283 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 A530099J19Rik-201ENSMUST00000151029 2764 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Mir19b-1-201ENSMUST00000102301 87 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm24867-201ENSMUST00000104161 107 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm23593-201ENSMUST00000104309 120 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm24235-201ENSMUST00000104319 129 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm12261-201ENSMUST00000117499 645 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm11367-201ENSMUST00000117802 120 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Mup12-201ENSMUST00000117932 926 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm11633-201ENSMUST00000118176 444 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm12379-201ENSMUST00000119607 391 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm14619-201ENSMUST00000120480 168 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm14581-201ENSMUST00000121726 198 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm25176-201ENSMUST00000122640 125 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm12336-201ENSMUST00000125962 322 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm14254-201ENSMUST00000136371 296 ntTSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm22328-201ENSMUST00000158074 112 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm10075-201ENSMUST00000162030 545 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm16318-201ENSMUST00000162402 601 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Mir6418-201ENSMUST00000185075 115 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Ska2l-ps-201ENSMUST00000186208 360 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm35077-201ENSMUST00000204999 275 ntTSL 3 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 AC166574.7-201ENSMUST00000228502 704 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 AC154239.1-201ENSMUST00000228565 406 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Fam183b-201ENSMUST00000060581 493 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm7117-201ENSMUST00000071515 387 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm25139-201ENSMUST00000083247 210 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Mir449a-201ENSMUST00000083641 91 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Mir218-2-201ENSMUST00000083649 110 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm43312-201ENSMUST00000201655 2466 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm38125-201ENSMUST00000194136 3438 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Vmn1r69-201ENSMUST00000163658 2558 ntAPPRIS P2 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Zfp950-207ENSMUST00000180544 2568 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Olfr1408-202ENSMUST00000200689 3453 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Olfr1126-202ENSMUST00000213366 1827 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Gm37558-201ENSMUST00000193684 2983 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Vmn2r-ps11-201ENSMUST00000176568 2730 ntBASIC4.74□□□□□ -1.65
Trim39Q9ESN2 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms