Protein–RNA interactions for Protein: Q9DC48

Cdc40, Pre-mRNA-processing factor 17, mousemouse

Known RBP Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdc40Q9DC48 Gm37081-201ENSMUST00000192034 196 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Ighv1-40-201ENSMUST00000194231 345 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Mir3073b-201ENSMUST00000199383 60 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm43478-201ENSMUST00000200381 292 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Gm44399-201ENSMUST00000205043 226 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 AC153361.2-202ENSMUST00000220405 842 ntTSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 AC160114.1-201ENSMUST00000221930 365 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 AC159293.2-201ENSMUST00000222289 424 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Vmn1r24-202ENSMUST00000228315 891 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Olfr235-203ENSMUST00000214551 2240 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Zfp946-204ENSMUST00000167740 1572 ntAPPRIS P1 TSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 AC153881.3-201ENSMUST00000218494 1561 ntBASIC2.78□□□□□ -1.96
Cdc40Q9DC48 Pak3-202ENSMUST00000112863 8657 ntAPPRIS ALT1 TSL 5 BASIC2.78□□□□□ -1.96
Cdc40Q9DC48 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm13614-201ENSMUST00000117306 503 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm15193-201ENSMUST00000120224 865 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm12723-201ENSMUST00000120700 451 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm25107-201ENSMUST00000122472 129 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 2210414B05Rik-201ENSMUST00000139600 872 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm22339-201ENSMUST00000157718 62 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm26722-201ENSMUST00000181237 1048 ntTSL 5 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm27522-201ENSMUST00000183949 230 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm29648-201ENSMUST00000188651 650 ntTSL 5 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm6445-201ENSMUST00000189515 1112 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 1700020G17Rik-204ENSMUST00000191429 622 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm37281-201ENSMUST00000192412 439 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm31520-201ENSMUST00000203048 733 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Mgst1-208ENSMUST00000204628 471 ntTSL 3 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm30738-201ENSMUST00000221346 502 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm17872-201ENSMUST00000222550 532 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 CT030704.1-201ENSMUST00000227521 699 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm10088-201ENSMUST00000074116 423 ntBASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Vmn1r211-202ENSMUST00000228645 5447 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
Cdc40Q9DC48 Gm26573-201ENSMUST00000181199 3020 ntTSL 5 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm14442-201ENSMUST00000119690 1736 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Olfr1132-202ENSMUST00000216082 3260 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm7905-201ENSMUST00000119933 1386 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm6221-201ENSMUST00000180064 1386 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm42479-201ENSMUST00000198654 1356 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm32693-201ENSMUST00000196538 2402 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Olfr309-202ENSMUST00000174158 3293 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm25313-201ENSMUST00000101817 116 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm13046-201ENSMUST00000117391 501 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 5330434G04Rik-201ENSMUST00000130264 511 ntTSL 3 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm16274-201ENSMUST00000139251 592 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm26215-201ENSMUST00000158584 139 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Vmn1r-ps84-201ENSMUST00000172853 923 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm23402-201ENSMUST00000178130 107 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm23287-201ENSMUST00000179427 116 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm23143-201ENSMUST00000180137 116 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm25120-201ENSMUST00000180148 79 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm28534-201ENSMUST00000187744 676 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Olfr783-ps1-201ENSMUST00000205105 441 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm45146-201ENSMUST00000207108 221 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Vmn1r48-201ENSMUST00000073415 909 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm24871-201ENSMUST00000083099 116 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm4017-201ENSMUST00000084813 338 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Rnu5g-201ENSMUST00000093721 116 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 AC137842.3-201ENSMUST00000228855 2397 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Gm3584-201ENSMUST00000173822 2565 ntBASIC2.76□□□□□ -1.97
Cdc40Q9DC48 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Zfp987-201ENSMUST00000091878 2798 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm7133-201ENSMUST00000187797 2039 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Mroh9-201ENSMUST00000096608 2956 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm7853-201ENSMUST00000100708 478 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Olfr483-201ENSMUST00000104917 1065 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm14409-201ENSMUST00000108963 1050 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm11356-201ENSMUST00000118974 192 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm11229-201ENSMUST00000121993 437 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Rab7b-203ENSMUST00000129905 476 ntTSL 2 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm24960-201ENSMUST00000157923 90 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm22538-201ENSMUST00000158169 299 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17187-201ENSMUST00000164622 410 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21842-201ENSMUST00000177552 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21626-201ENSMUST00000177791 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21562-201ENSMUST00000177888 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21539-201ENSMUST00000177925 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm17522-201ENSMUST00000178144 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21599-201ENSMUST00000178249 498 ntBASIC2.75□□□□□ -1.97
Cdc40Q9DC48 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
Retrieved 100 of 76,532 protein–RNA pairs in 68.5 ms