Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 AL589737.1-201ENSMUST00000221163 2763 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 Vmn1r89-208ENSMUST00000228587 2061 ntAPPRIS P2 BASIC4.33□□□□□ -1.72
Ddx56Q9D0R4 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm6176-202ENSMUST00000207633 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm4224-201ENSMUST00000211557 1594 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Olfr355-202ENSMUST00000213574 3610 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm24608-201ENSMUST00000104381 136 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm23322-201ENSMUST00000104464 167 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Snora64-201ENSMUST00000104521 134 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm25726-201ENSMUST00000104529 129 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm25624-201ENSMUST00000157222 275 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm26041-201ENSMUST00000158148 108 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm17218-201ENSMUST00000165911 410 ntTSL 3 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm24518-201ENSMUST00000180275 94 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm27286-201ENSMUST00000184934 179 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Hmgb1-rs16-201ENSMUST00000185927 613 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 2310030A07Rik-201ENSMUST00000186460 610 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm37743-201ENSMUST00000194645 376 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm9023-201ENSMUST00000198408 1038 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm44324-201ENSMUST00000198517 135 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Crs-ps-201ENSMUST00000203723 760 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 AC109214.2-201ENSMUST00000220089 358 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 AC158395.1-201ENSMUST00000227206 452 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm25411-201ENSMUST00000083760 151 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 n-R5s182-201ENSMUST00000083889 107 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Vmn2r-ps69-201ENSMUST00000173382 2565 ntBASIC4.32□□□□□ -1.72
Ddx56Q9D0R4 Gm10745-201ENSMUST00000192022 1523 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm37598-201ENSMUST00000194506 1301 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Tex47-203ENSMUST00000160634 2881 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm22272-201ENSMUST00000104039 134 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm14906-201ENSMUST00000119265 390 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm15760-201ENSMUST00000119553 283 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm1993-201ENSMUST00000120268 1131 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm16428-201ENSMUST00000121193 723 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm14765-201ENSMUST00000121954 326 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm8840-201ENSMUST00000122454 386 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm11281-201ENSMUST00000141391 576 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm16019-201ENSMUST00000149538 261 ntTSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm26101-201ENSMUST00000157246 105 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm24061-201ENSMUST00000157489 120 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm21754-201ENSMUST00000177550 479 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm25019-201ENSMUST00000179732 110 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-7-201ENSMUST00000180364 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir6996-201ENSMUST00000183922 61 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm29479-201ENSMUST00000190352 455 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-6-201ENSMUST00000196127 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-12-201ENSMUST00000197274 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-5-201ENSMUST00000197439 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-10-201ENSMUST00000197745 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-11-201ENSMUST00000197952 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-4-201ENSMUST00000198665 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-9-201ENSMUST00000200087 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Mir669a-8-201ENSMUST00000200268 87 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm4045-201ENSMUST00000204076 310 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm14442-201ENSMUST00000119690 1736 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm44682-201ENSMUST00000208501 2614 ntBASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Olfr1009-203ENSMUST00000216443 4047 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC4.31□□□□□ -1.72
Ddx56Q9D0R4 March1-202ENSMUST00000072482 3953 ntTSL 5 BASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Jmjd1c-206ENSMUST00000173689 8609 ntAPPRIS ALT2 TSL 2 BASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm14558-201ENSMUST00000117458 381 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm7123-201ENSMUST00000117647 213 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm14570-201ENSMUST00000119444 391 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm14586-201ENSMUST00000119571 408 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm22957-201ENSMUST00000122511 123 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm26036-201ENSMUST00000158149 144 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm23053-201ENSMUST00000175136 96 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Mir8106-201ENSMUST00000184520 139 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm28685-201ENSMUST00000187545 1101 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Trbv11-201ENSMUST00000194354 260 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm9379-201ENSMUST00000196790 646 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm44142-201ENSMUST00000203358 311 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm44009-201ENSMUST00000203539 521 ntTSL 5 BASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm45860-201ENSMUST00000212700 334 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 Gm29809-201ENSMUST00000218423 493 ntBASIC4.3□□□□□ -1.72
Ddx56Q9D0R4 AC155167.3-201ENSMUST00000226349 217 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 76,532 protein–RNA pairs in 95.9 ms