Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 AC173345.1-201ENSMUST00000222837 306 ntTSL 5 BASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 CT009713.6-201ENSMUST00000223615 294 ntBASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Gm6462-201ENSMUST00000081488 304 ntBASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Gm22297-201ENSMUST00000083312 106 ntBASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Gm7381-201ENSMUST00000098958 300 ntBASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
Pcdhb3Q91XZ7 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm43312-201ENSMUST00000201655 2466 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr459-203ENSMUST00000214976 3770 ntAPPRIS P1 TSL 2 BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Vmn2r89-201ENSMUST00000159611 2942 ntAPPRIS P4 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Vmn2r1-201ENSMUST00000029406 2739 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Syt4-201ENSMUST00000025110 3901 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 S100a5-202ENSMUST00000107329 431 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm11971-201ENSMUST00000117715 288 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm15297-201ENSMUST00000117795 290 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm25826-201ENSMUST00000157090 137 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm24402-201ENSMUST00000157873 91 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Mir3572-201ENSMUST00000175549 86 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm20651-201ENSMUST00000177219 329 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm23571-201ENSMUST00000180073 127 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Mir7674-201ENSMUST00000184964 63 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Rps4x-201ENSMUST00000033683 975 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Dph3b-ps-201ENSMUST00000076359 246 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm22062-201ENSMUST00000082563 107 ntBASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Pkhd1-201ENSMUST00000088448 12935 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr684-203ENSMUST00000215744 3084 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm19950-204ENSMUST00000208167 4196 ntTSL 5 BASIC5.41□□□□□ -1.54
Pcdhb3Q91XZ7 Gm29112-201ENSMUST00000188962 3487 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Ncoa7-203ENSMUST00000213836 2989 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr1303-202ENSMUST00000216114 2976 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Zfp62-202ENSMUST00000109197 4029 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr726-203ENSMUST00000213345 1728 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr705-203ENSMUST00000216009 3085 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Vmn1r178-204ENSMUST00000226640 2282 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm14326-202ENSMUST00000108930 1807 ntAPPRIS P1 TSL 2 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Mir466f-4-201ENSMUST00000116930 121 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Pfdn4-205ENSMUST00000136839 452 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm23121-201ENSMUST00000157653 173 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm23662-201ENSMUST00000158046 111 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm22447-201ENSMUST00000158155 92 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm24731-201ENSMUST00000158227 131 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Isx-202ENSMUST00000174427 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm24303-201ENSMUST00000178237 126 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Mir6335-201ENSMUST00000184081 98 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Mir7008-201ENSMUST00000184398 63 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm28683-201ENSMUST00000187134 615 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm18177-201ENSMUST00000188373 404 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 1700010I02Rik-202ENSMUST00000188525 430 ntTSL 3 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm28840-205ENSMUST00000189320 615 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm28835-203ENSMUST00000190062 615 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm29218-205ENSMUST00000190846 615 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm18444-201ENSMUST00000191239 629 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm9332-201ENSMUST00000198431 730 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Gm42961-201ENSMUST00000202023 181 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr628-202ENSMUST00000218266 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 n-R5s69-201ENSMUST00000083872 119 ntBASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Olfr243-201ENSMUST00000098194 951 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Pcdhb3Q91XZ7 Pcdh9-207ENSMUST00000195376 5096 ntTSL 5 BASIC5.4□□□□□ -1.55
Pcdhb3Q91XZ7 Slamf7-203ENSMUST00000192195 3975 ntAPPRIS P3 TSL 1 (best) BASIC5.4□□□□□ -1.55
Pcdhb3Q91XZ7 Nfatc3-202ENSMUST00000211991 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.4□□□□□ -1.55
Pcdhb3Q91XZ7 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.4□□□□□ -1.55
Pcdhb3Q91XZ7 Olfr1252-203ENSMUST00000216203 3243 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Pcdhb3Q91XZ7 Chrna6-201ENSMUST00000033882 2906 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Pcdhb3Q91XZ7 Vmn1r218-203ENSMUST00000227050 10364 ntAPPRIS P2 BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Lgalsl-201ENSMUST00000047028 3362 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gabrg2-201ENSMUST00000070725 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm14119-201ENSMUST00000119511 235 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm23184-201ENSMUST00000122594 131 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm15905-201ENSMUST00000137042 298 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm22867-201ENSMUST00000157499 109 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Smdt1-202ENSMUST00000159054 294 ntTSL 5 BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm29022-201ENSMUST00000190702 225 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm37617-201ENSMUST00000194309 159 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm36189-201ENSMUST00000204113 523 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 AC161256.1-201ENSMUST00000217312 213 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm24148-201ENSMUST00000082762 80 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm23517-201ENSMUST00000082830 192 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm7903-201ENSMUST00000113172 3677 ntAPPRIS P2 TSL 1 (best) BASIC5.39□□□□□ -1.55
Pcdhb3Q91XZ7 Gm5128-201ENSMUST00000113173 3677 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms