Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H1fooQ8VIK3 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
H1fooQ8VIK3 Primpol-201ENSMUST00000040468 3772 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
H1fooQ8VIK3 Gm37345-201ENSMUST00000193062 3138 ntBASIC3.61□□□□□ -1.83
H1fooQ8VIK3 Olfr599-202ENSMUST00000214329 2183 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
H1fooQ8VIK3 Gm21035-201ENSMUST00000207867 2608 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Kctd12b-202ENSMUST00000112572 4851 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gpr34-201ENSMUST00000041708 2088 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm12902-201ENSMUST00000118389 322 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm13873-201ENSMUST00000119208 427 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm11718-201ENSMUST00000119942 537 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm11398-201ENSMUST00000120330 320 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm7071-201ENSMUST00000120458 462 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm13000-201ENSMUST00000120937 496 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm11506-201ENSMUST00000122414 470 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm25807-201ENSMUST00000122783 305 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Frmpd1os-201ENSMUST00000134640 415 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm5958-201ENSMUST00000147698 297 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm24780-201ENSMUST00000157635 143 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm22312-201ENSMUST00000158005 130 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Rpl30-ps2-201ENSMUST00000160070 291 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm8906-202ENSMUST00000179375 465 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm25019-201ENSMUST00000179732 110 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm28141-201ENSMUST00000186676 342 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm28615-201ENSMUST00000187527 482 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm43236-201ENSMUST00000197414 313 ntTSL 5 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm34583-202ENSMUST00000202537 451 ntTSL 2 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm45673-201ENSMUST00000210293 358 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm18854-201ENSMUST00000211196 329 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm7692-201ENSMUST00000213534 409 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 CT030187.1-201ENSMUST00000220605 252 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm7240-201ENSMUST00000220769 664 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm20102-201ENSMUST00000222445 220 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 AC104832.1-201ENSMUST00000222938 550 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Ap3m1-208ENSMUST00000224016 764 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 AC102603.1-201ENSMUST00000227481 584 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 1700084M14Rik-201ENSMUST00000078832 559 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 AC126673.1-201ENSMUST00000223208 3856 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Adgre4-201ENSMUST00000025004 3491 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Rbbp6-203ENSMUST00000098062 6345 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Gm45304-201ENSMUST00000210303 2828 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Synpr-207ENSMUST00000223583 3362 ntBASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
H1fooQ8VIK3 Zfp72-202ENSMUST00000223163 4153 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 3110080E11Rik-201ENSMUST00000210736 3477 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Olfr1249-202ENSMUST00000216124 3047 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm45093-201ENSMUST00000206859 2463 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Olfr111-203ENSMUST00000215424 2548 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Mir193b-201ENSMUST00000103784 79 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm12386-201ENSMUST00000117380 688 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm14823-201ENSMUST00000117698 238 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm14987-201ENSMUST00000117820 676 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm15333-201ENSMUST00000118825 364 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm13687-201ENSMUST00000119857 282 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm11556-201ENSMUST00000120751 288 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm15212-201ENSMUST00000122403 466 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm13096-201ENSMUST00000127752 251 ntTSL 5 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm16354-201ENSMUST00000155376 150 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm24059-201ENSMUST00000157493 312 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Zakit-201ENSMUST00000157677 308 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm22314-201ENSMUST00000158007 281 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm22536-201ENSMUST00000158171 134 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Tcrg-C3-201ENSMUST00000164407 519 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Obox4-ps14-201ENSMUST00000177198 1127 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Trav7d-4-201ENSMUST00000178768 451 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Trav7-4-201ENSMUST00000181728 451 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 AC154374.1-201ENSMUST00000215351 351 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm23627-201ENSMUST00000082459 107 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm22502-201ENSMUST00000082488 107 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm22977-201ENSMUST00000082615 107 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Gm24149-201ENSMUST00000082757 107 ntBASIC3.59□□□□□ -1.83
H1fooQ8VIK3 Trappc13-205ENSMUST00000144060 3538 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.84
H1fooQ8VIK3 Slfn9-202ENSMUST00000092840 3862 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
H1fooQ8VIK3 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
H1fooQ8VIK3 Olfr1037-202ENSMUST00000213333 1610 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.84
H1fooQ8VIK3 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
H1fooQ8VIK3 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
H1fooQ8VIK3 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC3.58□□□□□ -1.84
H1fooQ8VIK3 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms