Protein–RNA interactions for Protein: Q8R370

Ushbp1, Usher syndrome type-1C protein-binding protein 1, mousemouse

Predictions only

Length 680 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ushbp1Q8R370 Gm23860-201ENSMUST00000179446 132 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm28500-201ENSMUST00000190286 151 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm37889-201ENSMUST00000194174 251 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Trbv24-201ENSMUST00000194614 347 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm44149-201ENSMUST00000204256 226 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm7039-201ENSMUST00000205138 346 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 AL669916.3-201ENSMUST00000213855 94 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 AL669916.6-201ENSMUST00000214610 94 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 AL669916.4-201ENSMUST00000215976 94 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 AL669916.1-201ENSMUST00000217640 94 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 CT025602.1-201ENSMUST00000227281 382 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Snord38a-201ENSMUST00000083746 71 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 9330158H04Rik-201ENSMUST00000101535 3174 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Ktn1-201ENSMUST00000022391 4484 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.55□□□□□ -1.68
Ushbp1Q8R370 Gm37625-201ENSMUST00000194969 4872 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Atp5j-203ENSMUST00000114193 680 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm22491-201ENSMUST00000157190 102 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm23024-201ENSMUST00000158770 292 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm23702-201ENSMUST00000158840 130 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm17538-201ENSMUST00000168236 327 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm17183-201ENSMUST00000171170 493 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Rpl23a-ps10-201ENSMUST00000185511 462 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm28700-201ENSMUST00000187614 579 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm28924-201ENSMUST00000190012 241 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm43853-201ENSMUST00000197162 301 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm19140-201ENSMUST00000209790 421 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm37797-201ENSMUST00000212114 815 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm45796-201ENSMUST00000212483 114 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC125020.2-201ENSMUST00000218894 348 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC116460.1-201ENSMUST00000219040 313 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC126275.2-201ENSMUST00000225224 253 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 CT025689.4-201ENSMUST00000225926 601 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC131029.2-202ENSMUST00000228430 496 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC155237.2-201ENSMUST00000228487 478 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Olfr418-202ENSMUST00000213420 4388 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 AC137842.3-201ENSMUST00000228855 2397 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Crisp1-201ENSMUST00000026498 1416 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm37498-201ENSMUST00000193524 4002 ntBASIC4.54□□□□□ -1.68
Ushbp1Q8R370 4932429P05Rik-201ENSMUST00000113958 3093 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Olfr1231-202ENSMUST00000216144 3961 ntAPPRIS P1 TSL 3 BASIC4.54□□□□□ -1.68
Ushbp1Q8R370 Gm13630-201ENSMUST00000127849 3650 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Zfp981-201ENSMUST00000105735 3038 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Trav12d-2-201ENSMUST00000103593 341 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Trav12n-2-201ENSMUST00000103619 341 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Mir669i-201ENSMUST00000117007 127 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm13664-201ENSMUST00000117304 345 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm14880-201ENSMUST00000117581 292 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Dnaic1-202ENSMUST00000119127 500 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm14428-201ENSMUST00000120408 822 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm13868-201ENSMUST00000122411 294 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm25572-201ENSMUST00000157527 172 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm24550-201ENSMUST00000158648 279 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm26005-201ENSMUST00000158802 134 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Mir1251-201ENSMUST00000175486 84 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm22716-201ENSMUST00000177596 107 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm26335-201ENSMUST00000178449 107 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm22851-201ENSMUST00000178741 94 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm25074-201ENSMUST00000178782 94 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm27226-201ENSMUST00000184676 511 ntTSL 2 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm37732-201ENSMUST00000194377 316 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm42850-201ENSMUST00000202094 201 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm8820-201ENSMUST00000204077 571 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 AC152979.1-201ENSMUST00000218214 289 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 AC187103.4-202ENSMUST00000225091 230 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 CT010506.2-201ENSMUST00000225618 183 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 AC126253.2-201ENSMUST00000226518 205 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 AC116656.1-201ENSMUST00000227040 755 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Dynap-201ENSMUST00000025390 1227 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Rpl31-ps13-201ENSMUST00000060994 378 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm24611-201ENSMUST00000083272 107 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Olfr1226-207ENSMUST00000220416 3387 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Gm42486-201ENSMUST00000200369 3486 ntBASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC4.53□□□□□ -1.68
Ushbp1Q8R370 Olfr716-207ENSMUST00000216871 4062 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms