Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm12805-201ENSMUST00000117305 1048 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm13314-201ENSMUST00000118742 335 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm11429-201ENSMUST00000119089 144 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm12137-201ENSMUST00000119565 346 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm26424-201ENSMUST00000122530 104 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm13782-201ENSMUST00000149515 352 ntTSL 3 BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm24914-201ENSMUST00000157285 313 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm24962-201ENSMUST00000157917 109 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm23028-201ENSMUST00000158773 265 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Vmn2r-ps75-201ENSMUST00000173251 213 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm24968-201ENSMUST00000179817 107 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm26621-201ENSMUST00000180413 700 ntTSL 2 BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm8649-201ENSMUST00000181799 233 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm27676-201ENSMUST00000183669 61 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm8197-201ENSMUST00000192906 363 ntTSL 5 BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm38333-201ENSMUST00000193608 604 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm42857-201ENSMUST00000200823 339 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 AC121844.1-201ENSMUST00000218706 137 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm31849-201ENSMUST00000220306 375 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 AC122924.2-201ENSMUST00000220799 298 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm26128-201ENSMUST00000083170 110 ntBASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Nup88Q8CEC0 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm14833-201ENSMUST00000118345 1027 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm14566-201ENSMUST00000118915 321 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm14581-201ENSMUST00000121726 198 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm24627-201ENSMUST00000122764 138 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm24666-201ENSMUST00000158937 167 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm4540-201ENSMUST00000170669 429 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm10717-208ENSMUST00000179839 681 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm10717-209ENSMUST00000179982 681 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm29600-201ENSMUST00000188687 377 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm45554-202ENSMUST00000210964 1090 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm46146-201ENSMUST00000217483 346 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm8074-201ENSMUST00000095071 252 ntBASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Gm10717-204ENSMUST00000099056 669 ntTSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Vmn2r42-205ENSMUST00000146278 3086 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Nup88Q8CEC0 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Nup88Q8CEC0 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Nup88Q8CEC0 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC3.84□□□□□ -1.8
Nup88Q8CEC0 Gm45662-201ENSMUST00000210054 2098 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Mir883a-201ENSMUST00000104824 76 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm14399-202ENSMUST00000108929 813 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 2010106E10Rik-202ENSMUST00000113412 1276 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm7173-202ENSMUST00000114021 1083 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm14622-201ENSMUST00000117117 468 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm13803-201ENSMUST00000117547 489 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Psmb7-ps2-201ENSMUST00000118546 820 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm11389-201ENSMUST00000121407 430 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm17054-201ENSMUST00000169811 259 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm22910-201ENSMUST00000178568 132 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm26960-201ENSMUST00000182263 412 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Mir6413-201ENSMUST00000184049 108 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm28623-201ENSMUST00000187219 192 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm29576-201ENSMUST00000188020 678 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm28354-201ENSMUST00000190904 678 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm37085-201ENSMUST00000193780 196 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm5983-201ENSMUST00000197739 770 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm44274-201ENSMUST00000203417 256 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm44600-201ENSMUST00000208540 111 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm36525-201ENSMUST00000222590 638 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 AC133176.1-201ENSMUST00000226668 219 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 AC107453.2-201ENSMUST00000227714 655 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Olfr779-201ENSMUST00000069063 390 ntAPPRIS ALT2 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm22265-201ENSMUST00000082947 116 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.83□□□□□ -1.8
Nup88Q8CEC0 AC137842.3-201ENSMUST00000228855 2397 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm42614-201ENSMUST00000198724 1554 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm26002-201ENSMUST00000101915 107 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Mir582-201ENSMUST00000103758 81 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm12149-201ENSMUST00000117511 654 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm13082-201ENSMUST00000118877 561 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm14915-201ENSMUST00000120747 204 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm12639-201ENSMUST00000121400 493 ntBASIC3.82□□□□□ -1.8
Nup88Q8CEC0 Gm23791-201ENSMUST00000122553 293 ntBASIC3.82□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms