Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm15323-201ENSMUST00000156109 429 ntTSL 3 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm22889-201ENSMUST00000158639 58 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm2862-201ENSMUST00000161524 328 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Clec9a-203ENSMUST00000164513 714 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm20468-201ENSMUST00000172664 452 ntTSL 3 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm19932-201ENSMUST00000177033 313 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm21737-201ENSMUST00000178112 664 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm20874-201ENSMUST00000178356 663 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm21744-201ENSMUST00000178403 662 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm20901-201ENSMUST00000180177 664 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Mir6938-201ENSMUST00000184173 63 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm10193-201ENSMUST00000188288 231 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm28090-201ENSMUST00000189458 664 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm21647-201ENSMUST00000189755 664 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm36984-201ENSMUST00000192770 235 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm38316-201ENSMUST00000194838 469 ntTSL 5 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm5552-201ENSMUST00000197149 515 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm6929-201ENSMUST00000210930 468 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Mir181a-1-201ENSMUST00000083631 87 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Gm23503-201ENSMUST00000083903 107 ntBASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Vmn2r19-201ENSMUST00000073948 2565 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Vps53Q8CCB4 Mga-204ENSMUST00000110774 13931 ntAPPRIS P3 TSL 5 BASIC4.46□□□□□ -1.69
Vps53Q8CCB4 Gm37792-201ENSMUST00000195761 3413 ntBASIC4.46□□□□□ -1.69
Vps53Q8CCB4 Cntn6-202ENSMUST00000161070 3515 ntTSL 5 BASIC4.46□□□□□ -1.69
Vps53Q8CCB4 Olfr290-202ENSMUST00000214501 5196 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Olfr290-204ENSMUST00000216367 5182 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm14816-201ENSMUST00000117174 294 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm11372-201ENSMUST00000117348 570 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm13268-201ENSMUST00000117485 433 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm15268-201ENSMUST00000118845 352 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm14559-201ENSMUST00000121745 496 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm25784-201ENSMUST00000122524 81 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Junos-205ENSMUST00000130684 614 ntTSL 3 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm23753-201ENSMUST00000157575 149 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm23865-201ENSMUST00000157723 97 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm24014-201ENSMUST00000157728 157 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm23028-201ENSMUST00000158773 265 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm25365-201ENSMUST00000158852 121 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Rpl30-ps6-201ENSMUST00000163337 348 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm27828-201ENSMUST00000184108 119 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm18291-201ENSMUST00000190791 301 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm37892-201ENSMUST00000192018 437 ntTSL 3 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm37239-201ENSMUST00000193510 141 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm29704-201ENSMUST00000196011 253 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm42924-201ENSMUST00000197261 185 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm43505-201ENSMUST00000200579 139 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm35371-201ENSMUST00000216204 579 ntTSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 AC118639.1-204ENSMUST00000226401 694 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 mt-Td-201ENSMUST00000082404 70 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm24623-201ENSMUST00000082616 194 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm24043-201ENSMUST00000083108 116 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Snord38a-201ENSMUST00000083746 71 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Olfr787-202ENSMUST00000213329 4958 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Vps53Q8CCB4 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.46□□□□□ -1.7
Vps53Q8CCB4 Gm43486-201ENSMUST00000196431 4339 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Zfp458-201ENSMUST00000045969 3488 ntAPPRIS P2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm44525-201ENSMUST00000183129 2634 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Lrp1b-201ENSMUST00000052550 16294 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Dppa1-202ENSMUST00000109227 551 ntAPPRIS P1 TSL 2 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm11110-201ENSMUST00000112915 1013 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm16024-201ENSMUST00000128841 171 ntTSL 3 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm13307-201ENSMUST00000141375 493 ntTSL 5 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm25606-201ENSMUST00000158363 95 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm9071-201ENSMUST00000165915 474 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm21815-201ENSMUST00000178213 664 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Mir6951-201ENSMUST00000183910 75 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm28785-201ENSMUST00000187478 379 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm38329-201ENSMUST00000193473 427 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm9227-201ENSMUST00000194733 566 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm45031-201ENSMUST00000206800 288 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm45023-201ENSMUST00000207951 379 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC157494.1-201ENSMUST00000221127 549 ntTSL 5 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC153662.1-201ENSMUST00000222220 270 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC173481.1-201ENSMUST00000223351 270 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC134577.1-201ENSMUST00000227572 295 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC166369.1-201ENSMUST00000228126 351 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 AC139350.4-201ENSMUST00000228483 798 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm28044-201ENSMUST00000044819 551 ntAPPRIS P1 TSL 3 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Snora7a-201ENSMUST00000082629 140 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Mir370-201ENSMUST00000083499 79 ntBASIC4.45□□□□□ -1.7
Vps53Q8CCB4 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms