Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4930522H14Rik-201ENSMUST00000082306 849 ntAPPRIS ALT2 TSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Olfr1140-201ENSMUST00000214723 1421 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Gm13340-201ENSMUST00000117219 1545 ntBASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 mt-Co1-201ENSMUST00000082402 1545 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Gm15303-201ENSMUST00000118676 2624 ntBASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Gm2869-201ENSMUST00000124359 2621 ntBASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Gm23152-201ENSMUST00000175322 116 ntBASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Mir7039-201ENSMUST00000183852 85 ntBASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Mir8103-201ENSMUST00000183945 107 ntBASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Csn1s1-201ENSMUST00000094641 1411 ntAPPRIS P1 TSL 1 (best) BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Olfr995-201ENSMUST00000099924 1113 ntAPPRIS P1 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.81□□□□□ -2.12
Col6a6Q8C6K9 Gm24098-201ENSMUST00000102075 109 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm25381-201ENSMUST00000102078 109 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm24769-201ENSMUST00000158506 129 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm22923-201ENSMUST00000174952 110 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm23967-201ENSMUST00000175062 78 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm8356-203ENSMUST00000178896 615 ntTSL 5 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm44431-201ENSMUST00000203500 413 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr1202-203ENSMUST00000217059 1153 ntAPPRIS P1 TSL 3 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm25813-201ENSMUST00000082748 191 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm25402-201ENSMUST00000082966 131 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 1700017N19Rik-207ENSMUST00000190708 1945 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm42659-201ENSMUST00000196955 1754 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr1327-ps1-201ENSMUST00000117953 835 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm11876-201ENSMUST00000120002 269 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm25488-201ENSMUST00000158728 118 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm17183-201ENSMUST00000171170 493 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Gm46312-201ENSMUST00000220961 420 ntBASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr1466-201ENSMUST00000075868 933 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr1040-201ENSMUST00000099909 942 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC1.8□□□□□ -2.12
Col6a6Q8C6K9 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm43882-201ENSMUST00000204871 2264 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm15157-201ENSMUST00000121852 702 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm25106-201ENSMUST00000122672 134 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm26345-201ENSMUST00000157534 120 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm22554-201ENSMUST00000157798 147 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm37515-201ENSMUST00000193321 3817 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm43722-201ENSMUST00000196054 124 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm43655-201ENSMUST00000197367 222 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 AC161250.1-201ENSMUST00000213426 1111 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 AC153532.1-201ENSMUST00000218126 1111 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Olfr497-201ENSMUST00000076406 945 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm10203-201ENSMUST00000087348 198 ntAPPRIS P1 TSL 5 BASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm37903-201ENSMUST00000192122 2381 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm24900-201ENSMUST00000158128 134 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm3030-201ENSMUST00000163410 516 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm27330-201ENSMUST00000184689 132 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm27608-201ENSMUST00000184822 162 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm37455-201ENSMUST00000191993 529 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm23460-201ENSMUST00000083258 109 ntBASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
Col6a6Q8C6K9 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm20776-201ENSMUST00000189940 700 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Mir3069-201ENSMUST00000198802 65 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm44072-201ENSMUST00000203666 383 ntTSL 3 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 3110043J17Rik-201ENSMUST00000219153 760 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 AC123658.1-201ENSMUST00000228364 867 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r25-202ENSMUST00000228585 909 ntAPPRIS P1 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Olfr1129-202ENSMUST00000213315 2255 ntAPPRIS P1 TSL 2 BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Rgs1-208ENSMUST00000189061 3841 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm14421-201ENSMUST00000121755 1958 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 CT009504.1-201ENSMUST00000218252 3330 ntBASIC1.78□□□□□ -2.12
Col6a6Q8C6K9 Gm614-201ENSMUST00000101358 748 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm14602-201ENSMUST00000118625 340 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm12495-201ENSMUST00000119750 447 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm22316-201ENSMUST00000158012 216 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm15900-201ENSMUST00000161584 342 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm7675-201ENSMUST00000208828 686 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm6030-201ENSMUST00000078768 402 ntBASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Olfr172-202ENSMUST00000214139 1778 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.13
Col6a6Q8C6K9 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
Col6a6Q8C6K9 Gm12782-201ENSMUST00000117519 727 ntBASIC1.77□□□□□ -2.13
Retrieved 100 of 76,532 protein–RNA pairs in 79.9 ms