Protein–RNA interactions for Protein: Q80W14

Prpf40b, Pre-mRNA-processing factor 40 homolog B, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40bQ80W14 Gm43197-201ENSMUST00000201493 2583 ntBASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Krtap24-1-201ENSMUST00000052512 1571 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Rbm31y-201ENSMUST00000179408 1955 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Gm21379-201ENSMUST00000179772 1955 ntBASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Olfr535-207ENSMUST00000217235 5186 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
Prpf40bQ80W14 Ulbp1-203ENSMUST00000218087 5959 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Fat2-202ENSMUST00000108864 14423 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm3027-201ENSMUST00000167579 451 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm3104-201ENSMUST00000171004 473 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm21726-201ENSMUST00000179654 392 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm28257-201ENSMUST00000185244 463 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm37692-201ENSMUST00000192633 232 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm9722-201ENSMUST00000194568 802 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm43828-201ENSMUST00000196890 639 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 AC132344.1-201ENSMUST00000221289 376 ntTSL 3 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm9309-201ENSMUST00000223537 546 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Sprr2e-201ENSMUST00000068399 647 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Spink5-201ENSMUST00000069245 4785 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Senp7-202ENSMUST00000089360 4802 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Ankrd28-204ENSMUST00000227089 3522 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Gm37329-201ENSMUST00000192973 2057 ntBASIC5.19□□□□□ -1.58
Prpf40bQ80W14 Igsf10-201ENSMUST00000039419 10084 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm43834-201ENSMUST00000197097 4830 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Vmn2r46-201ENSMUST00000171523 2430 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Cyp7a1-201ENSMUST00000029905 4172 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 AI987944-204ENSMUST00000206801 1701 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm25169-201ENSMUST00000104190 129 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21842-201ENSMUST00000177552 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21626-201ENSMUST00000177791 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21562-201ENSMUST00000177888 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21539-201ENSMUST00000177925 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21599-201ENSMUST00000178249 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21914-201ENSMUST00000178452 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21723-201ENSMUST00000178692 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21916-201ENSMUST00000178771 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21801-201ENSMUST00000178865 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21633-201ENSMUST00000178941 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21821-201ENSMUST00000179646 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21588-201ENSMUST00000180074 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21780-201ENSMUST00000180128 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21572-201ENSMUST00000180134 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm21529-201ENSMUST00000180175 498 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm29370-202ENSMUST00000187476 499 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm37701-201ENSMUST00000192947 1100 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm38150-201ENSMUST00000192996 452 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Mir129b-201ENSMUST00000197461 65 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm43393-201ENSMUST00000200147 194 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm3338-201ENSMUST00000220982 269 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm25140-201ENSMUST00000083254 140 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Btbd35f23-201ENSMUST00000189190 1943 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm17969-201ENSMUST00000185706 2557 ntBASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Prpf40bQ80W14 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm38259-201ENSMUST00000194602 3534 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Muc15-202ENSMUST00000111016 3421 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Ktn1-226ENSMUST00000191511 3962 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm3086-201ENSMUST00000110560 620 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm26102-201ENSMUST00000157251 284 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm26347-201ENSMUST00000157526 131 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm24505-201ENSMUST00000157682 126 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm22849-201ENSMUST00000157713 307 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm24409-201ENSMUST00000157881 152 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 4930556I23Rik-201ENSMUST00000160659 560 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm13249-201ENSMUST00000177803 345 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm16378-201ENSMUST00000179168 342 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm13144-201ENSMUST00000179385 345 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm26622-201ENSMUST00000180520 298 ntBASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Cox6b2-206ENSMUST00000182738 423 ntTSL 2 BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Trav17-202ENSMUST00000186545 338 ntAPPRIS ALT2 BASIC5.17□□□□□ -1.58
Prpf40bQ80W14 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.17□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 110.4 ms