Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm37999-201ENSMUST00000195178 1809 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 AC103672.3-201ENSMUST00000227649 3243 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Trim56Q80VI1 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC5.15□□□□□ -1.58
Trim56Q80VI1 Gm26767-201ENSMUST00000180936 4476 ntTSL 5 BASIC5.15□□□□□ -1.58
Trim56Q80VI1 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
Trim56Q80VI1 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
Trim56Q80VI1 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.15□□□□□ -1.58
Trim56Q80VI1 Mir761-201ENSMUST00000103245 76 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Igkv6-32-201ENSMUST00000103377 366 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm13386-201ENSMUST00000117677 124 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm6584-201ENSMUST00000119671 447 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm8200-201ENSMUST00000122390 222 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm15735-201ENSMUST00000136187 514 ntTSL 3 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm27999-201ENSMUST00000183539 193 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm27233-201ENSMUST00000184030 307 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm27414-201ENSMUST00000185033 381 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm28830-201ENSMUST00000188192 213 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm6059-201ENSMUST00000196903 340 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm45200-201ENSMUST00000207434 919 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm45704-201ENSMUST00000212582 403 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Olfr453-201ENSMUST00000053647 954 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Olfr1202-201ENSMUST00000072057 930 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Snord22-201ENSMUST00000083153 126 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Olfr713-201ENSMUST00000098139 975 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Sult2a8-203ENSMUST00000168252 2097 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 AC131743.1-201ENSMUST00000222138 4024 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Ndst4-205ENSMUST00000174648 4996 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC5.15□□□□□ -1.59
Trim56Q80VI1 Gm37363-201ENSMUST00000192336 2233 ntBASIC5.15□□□□□ -1.59
Trim56Q80VI1 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm42717-201ENSMUST00000197309 3463 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Agbl1-201ENSMUST00000026854 3452 ntAPPRIS ALT2 TSL 2 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm43923-201ENSMUST00000203992 2911 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Fam205c-202ENSMUST00000107978 1451 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Vmn1r43-204ENSMUST00000226983 12805 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Pnpla8-201ENSMUST00000043082 13507 ntAPPRIS P2 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm8989-201ENSMUST00000184782 7275 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 AC142245.1-201ENSMUST00000226611 1505 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Igf1-202ENSMUST00000095360 7052 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Mir599-201ENSMUST00000102378 88 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm6760-201ENSMUST00000114682 604 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm12571-201ENSMUST00000118132 243 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm12190-201ENSMUST00000120001 187 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm22453-201ENSMUST00000122801 318 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm24224-201ENSMUST00000158828 258 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm7953-201ENSMUST00000168278 469 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm23725-201ENSMUST00000177876 107 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm29484-201ENSMUST00000186067 324 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm29183-201ENSMUST00000188600 790 ntTSL 5 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Igkv3-12-1-201ENSMUST00000197093 351 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm42990-201ENSMUST00000199231 312 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 CR974429.1-201ENSMUST00000220877 827 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Rny1-201ENSMUST00000083767 112 ntBASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.14□□□□□ -1.59
Trim56Q80VI1 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Serpinb3a-202ENSMUST00000112717 1611 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Rpl31-ps22-201ENSMUST00000117961 337 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm12156-201ENSMUST00000119188 554 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm11388-201ENSMUST00000120908 159 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm26278-201ENSMUST00000157098 132 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm25913-201ENSMUST00000157617 135 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm25605-201ENSMUST00000158364 124 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm17191-201ENSMUST00000165200 417 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm22448-201ENSMUST00000179254 107 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm26189-201ENSMUST00000179879 107 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Mir6537-201ENSMUST00000184150 110 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm28660-201ENSMUST00000186496 253 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm36406-202ENSMUST00000203761 551 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm45395-201ENSMUST00000209891 559 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC5.13□□□□□ -1.59
Trim56Q80VI1 AC163033.1-201ENSMUST00000218608 157 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm9309-201ENSMUST00000223537 546 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 AC157772.2-201ENSMUST00000228202 259 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm10237-201ENSMUST00000078393 273 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Gm23677-201ENSMUST00000083156 104 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Mir202-201ENSMUST00000083568 72 ntBASIC5.13□□□□□ -1.59
Trim56Q80VI1 Olfr152-201ENSMUST00000090709 951 ntAPPRIS P2 BASIC5.13□□□□□ -1.59
Retrieved 100 of 76,532 protein–RNA pairs in 134.6 ms