Protein–RNA interactions for Protein: Q63870

Col7a1, Collagen alpha-1(VII) chain, mousemouse

Predictions only

Length 2,944 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1Q63870 Gm13153-201ENSMUST00000120969 637 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm22517-201ENSMUST00000158265 136 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm24771-201ENSMUST00000158508 137 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm22093-201ENSMUST00000158980 111 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm24044-201ENSMUST00000083107 156 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 1110057P08Rik-201ENSMUST00000089097 465 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col7a1Q63870 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col7a1Q63870 BC028528-205ENSMUST00000171519 447 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col7a1Q63870 AL603834.1-201ENSMUST00000198372 121 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm43596-201ENSMUST00000202818 884 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm33501-201ENSMUST00000209257 1193 ntTSL 5 BASIC1.73□□□□□ -2.13
Col7a1Q63870 CR974485.1-201ENSMUST00000222408 402 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
Col7a1Q63870 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
Col7a1Q63870 Ccdc144b-201ENSMUST00000166644 1685 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Mir294-201ENSMUST00000104710 84 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm11877-201ENSMUST00000118921 852 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm14065-201ENSMUST00000120848 585 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Vmn1r174-201ENSMUST00000167551 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col7a1Q63870 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col7a1Q63870 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Col7a1Q63870 AC159297.1-201ENSMUST00000218689 290 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Gm25813-201ENSMUST00000082748 191 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Snord14e-201ENSMUST00000082857 90 ntBASIC1.73□□□□□ -2.13
Col7a1Q63870 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Col7a1Q63870 Xirp2-202ENSMUST00000112347 11979 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm43373-201ENSMUST00000202552 2870 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 Dync2h1-206ENSMUST00000147193 13103 ntAPPRIS ALT2 TSL 5 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col7a1Q63870 Mir301b-201ENSMUST00000102333 97 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm13661-201ENSMUST00000154297 318 ntTSL 3 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm28614-201ENSMUST00000186483 458 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 Olfr1453-201ENSMUST00000087773 924 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Olfr1100-201ENSMUST00000094913 969 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col7a1Q63870 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 Olfr340-201ENSMUST00000072854 939 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Olfr911-ps1-201ENSMUST00000074987 940 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Col7a1Q63870 Gm24445-201ENSMUST00000083981 107 ntBASIC1.72□□□□□ -2.13
Col7a1Q63870 4930524B17Rik-201ENSMUST00000200755 1870 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
Col7a1Q63870 Olfr1107-202ENSMUST00000214049 4388 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col7a1Q63870 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm6374-201ENSMUST00000159051 788 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm22852-201ENSMUST00000177899 101 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm6462-201ENSMUST00000081488 304 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Col7a1Q63870 Cngb3-201ENSMUST00000102999 4708 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 AW554918-203ENSMUST00000100131 1684 ntTSL 5 BASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm17194-201ENSMUST00000164610 348 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Vmn2r-ps77-201ENSMUST00000174505 320 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm29395-201ENSMUST00000188551 1049 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
Col7a1Q63870 Olfr1543-ps1-201ENSMUST00000217448 908 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 AC131743.3-201ENSMUST00000222099 662 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm42664-201ENSMUST00000199417 3239 ntBASIC1.71□□□□□ -2.14
Col7a1Q63870 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC1.71□□□□□ -2.14
Col7a1Q63870 Gm14882-201ENSMUST00000117216 218 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm12090-201ENSMUST00000118692 758 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm23599-201ENSMUST00000157261 251 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm22214-201ENSMUST00000157563 172 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm22891-201ENSMUST00000158641 164 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm23342-201ENSMUST00000158958 115 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm25470-201ENSMUST00000175576 111 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm28923-201ENSMUST00000187755 322 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 AC158536.1-201ENSMUST00000222510 256 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Epyc-201ENSMUST00000020094 1723 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
Col7a1Q63870 Olfr361-203ENSMUST00000216663 2617 ntAPPRIS P1 TSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm11446-201ENSMUST00000121319 866 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm25888-201ENSMUST00000157778 302 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm44995-201ENSMUST00000207056 504 ntTSL 3 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
Col7a1Q63870 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm13771-201ENSMUST00000117988 238 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm24237-201ENSMUST00000157790 132 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm24677-201ENSMUST00000158755 150 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm23340-201ENSMUST00000158955 123 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm9022-202ENSMUST00000183285 483 ntBASIC1.7□□□□□ -2.14
Col7a1Q63870 Gm29429-201ENSMUST00000187071 121 ntBASIC1.7□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 80.8 ms