Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim28Q62318 Gm8041-201ENSMUST00000199755 616 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm44355-201ENSMUST00000200417 104 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm4528-201ENSMUST00000207905 551 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 AC166358.10-201ENSMUST00000220556 144 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 AC129202.3-201ENSMUST00000224413 733 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 AC129308.2-201ENSMUST00000224588 789 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 AC154506.1-201ENSMUST00000225178 621 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Trim28Q62318 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Trim28Q62318 n-R5s166-201ENSMUST00000082898 121 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Abi3bp-202ENSMUST00000096012 4387 ntAPPRIS ALT2 TSL 1 (best) BASIC4.84□□□□□ -1.63
Trim28Q62318 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Trim28Q62318 Gm45577-201ENSMUST00000210206 2287 ntBASIC4.84□□□□□ -1.64
Trim28Q62318 Gm37096-201ENSMUST00000192317 2058 ntBASIC4.84□□□□□ -1.64
Trim28Q62318 AC140397.1-201ENSMUST00000225563 4562 ntBASIC4.84□□□□□ -1.64
Trim28Q62318 AC164102.1-201ENSMUST00000220524 1553 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Fancb-201ENSMUST00000057150 2422 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm14901-201ENSMUST00000119001 283 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm6071-201ENSMUST00000119561 440 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm5384-201ENSMUST00000120313 463 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Vmn1r-ps116-201ENSMUST00000121544 292 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm16327-201ENSMUST00000137146 228 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm23231-201ENSMUST00000157299 104 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm22336-201ENSMUST00000157719 107 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm24553-201ENSMUST00000158653 131 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm23047-201ENSMUST00000177661 94 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm25944-201ENSMUST00000178758 94 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Rhoay-ps3-201ENSMUST00000187648 576 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm43114-201ENSMUST00000198298 343 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm45063-201ENSMUST00000203726 472 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm44174-201ENSMUST00000205022 141 ntTSL 2 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm35857-201ENSMUST00000212739 178 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm20734-201ENSMUST00000216939 193 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm17890-201ENSMUST00000221419 757 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC4.83□□□□□ -1.64
Trim28Q62318 Olfr339-201ENSMUST00000071437 930 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Trim28Q62318 Mir325-201ENSMUST00000083491 98 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Gm26176-201ENSMUST00000083795 105 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Abi3bp-203ENSMUST00000096013 4495 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Trim28Q62318 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm38207-201ENSMUST00000193009 3505 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm44435-201ENSMUST00000204379 4119 ntBASIC4.83□□□□□ -1.64
Trim28Q62318 Olfr1043-204ENSMUST00000216028 1824 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Trim28Q62318 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Trim28Q62318 Gm7133-201ENSMUST00000187797 2039 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim28Q62318 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim28Q62318 Igkv3-7-201ENSMUST00000103399 299 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Trim28Q62318 Gm11923-201ENSMUST00000118135 508 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm14269-201ENSMUST00000120455 306 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm25520-201ENSMUST00000158389 118 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm16303-201ENSMUST00000161498 390 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm25748-201ENSMUST00000175487 70 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
Trim28Q62318 Gm25942-201ENSMUST00000180080 110 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm27803-201ENSMUST00000183763 119 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm17966-201ENSMUST00000193453 594 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC4.82□□□□□ -1.64
Trim28Q62318 AL513022.1-201ENSMUST00000220489 504 ntTSL 5 BASIC4.82□□□□□ -1.64
Trim28Q62318 AC115878.1-201ENSMUST00000227247 334 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 AC117588.2-201ENSMUST00000228340 311 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim28Q62318 Gm24147-201ENSMUST00000082763 144 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Mir504-201ENSMUST00000093602 79 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm10356-201ENSMUST00000097152 1258 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim28Q62318 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC4.82□□□□□ -1.64
Trim28Q62318 Gm20631-201ENSMUST00000177239 5697 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Trim28Q62318 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim28Q62318 Cp-201ENSMUST00000003714 4092 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Trim28Q62318 BC002059-202ENSMUST00000190415 1964 ntTSL 2 BASIC4.82□□□□□ -1.64
Trim28Q62318 Gm37329-201ENSMUST00000192973 2057 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.81□□□□□ -1.64
Trim28Q62318 Gm24987-201ENSMUST00000104453 134 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm14835-201ENSMUST00000119039 315 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm11352-201ENSMUST00000119264 517 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm15377-201ENSMUST00000119594 246 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm13170-201ENSMUST00000119716 643 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm11438-201ENSMUST00000121582 189 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm13266-201ENSMUST00000141869 579 ntTSL 2 BASIC4.81□□□□□ -1.64
Trim28Q62318 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.81□□□□□ -1.64
Trim28Q62318 Gm25185-201ENSMUST00000157754 96 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm22890-201ENSMUST00000158642 144 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm25977-201ENSMUST00000158697 85 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 1700010K23Rik-201ENSMUST00000174502 376 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim28Q62318 Gm26141-201ENSMUST00000175299 126 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Trim28Q62318 Mir6481-201ENSMUST00000184617 110 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 Gm29610-201ENSMUST00000187749 453 ntBASIC4.81□□□□□ -1.64
Trim28Q62318 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Trim28Q62318 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 160.7 ms