Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Gm44601-201ENSMUST00000206678 2720 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
Trim27Q62158 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.88□□□□□ -1.79
Trim27Q62158 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
Trim27Q62158 Olfr1253-202ENSMUST00000213484 4812 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim27Q62158 Mir673-201ENSMUST00000102361 91 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm6274-201ENSMUST00000118173 797 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm12935-201ENSMUST00000119352 246 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
Trim27Q62158 Rps13-ps7-201ENSMUST00000122045 368 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm14129-201ENSMUST00000122436 291 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm43191-201ENSMUST00000140672 704 ntAPPRIS P1 TSL 3 BASIC3.87□□□□□ -1.79
Trim27Q62158 9530034E10Rik-201ENSMUST00000146982 502 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim27Q62158 Gm24553-201ENSMUST00000158653 131 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim27Q62158 Gm28956-201ENSMUST00000189047 427 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm37085-201ENSMUST00000193780 196 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 1700042D02Rik-201ENSMUST00000198232 389 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim27Q62158 Amd-ps5-201ENSMUST00000198406 989 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm19244-201ENSMUST00000204340 253 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim27Q62158 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
Trim27Q62158 AC141642.1-201ENSMUST00000220598 229 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Gm7753-201ENSMUST00000221007 867 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Mucl1-201ENSMUST00000078842 621 ntAPPRIS ALT2 BASIC3.87□□□□□ -1.79
Trim27Q62158 Gm22304-201ENSMUST00000082688 129 ntBASIC3.87□□□□□ -1.79
Trim27Q62158 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC3.87□□□□□ -1.79
Trim27Q62158 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
Trim27Q62158 Tfpi-204ENSMUST00000111714 3614 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim27Q62158 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.87□□□□□ -1.79
Trim27Q62158 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
Trim27Q62158 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.86□□□□□ -1.79
Trim27Q62158 4932412D23Rik-203ENSMUST00000142270 4105 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim27Q62158 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Gm7853-201ENSMUST00000100708 478 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Mir883a-201ENSMUST00000104824 76 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
Trim27Q62158 Gm9440-201ENSMUST00000119667 539 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm12706-201ENSMUST00000121588 698 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm12693-201ENSMUST00000121965 483 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm25102-201ENSMUST00000122479 112 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm12649-201ENSMUST00000137509 581 ntTSL 3 BASIC3.86□□□□□ -1.79
Trim27Q62158 Gm22792-201ENSMUST00000157225 133 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm24198-201ENSMUST00000157812 108 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm15946-201ENSMUST00000160654 423 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm23145-201ENSMUST00000178912 79 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Mir6408-201ENSMUST00000183643 91 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm28155-201ENSMUST00000191066 151 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Gm38075-201ENSMUST00000191979 920 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Gm36831-201ENSMUST00000196485 631 ntTSL 2 BASIC3.86□□□□□ -1.79
Trim27Q62158 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
Trim27Q62158 AC152979.1-201ENSMUST00000218214 289 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 AC138027.1-201ENSMUST00000218324 472 ntTSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Gm19540-201ENSMUST00000221843 810 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 AC154532.2-201ENSMUST00000228947 598 ntBASIC3.86□□□□□ -1.79
Trim27Q62158 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Trim27Q62158 Fam81b-201ENSMUST00000208418 2760 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Olfr476-202ENSMUST00000217173 2539 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Olfr855-202ENSMUST00000215587 1797 ntAPPRIS P1 TSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Oog1-203ENSMUST00000222332 1464 ntAPPRIS ALT2 TSL 5 BASIC3.86□□□□□ -1.79
Trim27Q62158 Gm26696-201ENSMUST00000181941 2848 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim27Q62158 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm4916-201ENSMUST00000126139 642 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm5958-201ENSMUST00000147698 297 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm15640-201ENSMUST00000152070 527 ntTSL 2 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm24314-201ENSMUST00000158274 123 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm22769-201ENSMUST00000158367 98 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21842-201ENSMUST00000177552 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21626-201ENSMUST00000177791 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21562-201ENSMUST00000177888 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21539-201ENSMUST00000177925 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm17522-201ENSMUST00000178144 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21599-201ENSMUST00000178249 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21914-201ENSMUST00000178452 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21723-201ENSMUST00000178692 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21916-201ENSMUST00000178771 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Zfp950-206ENSMUST00000178819 171 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21801-201ENSMUST00000178865 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21633-201ENSMUST00000178941 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21821-201ENSMUST00000179646 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21588-201ENSMUST00000180074 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21780-201ENSMUST00000180128 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21572-201ENSMUST00000180134 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm21529-201ENSMUST00000180175 498 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm26866-201ENSMUST00000180414 802 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm27659-201ENSMUST00000183472 98 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm27783-201ENSMUST00000183534 105 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Mir8096-201ENSMUST00000184526 127 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm29370-202ENSMUST00000187476 499 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm29640-201ENSMUST00000187972 278 ntBASIC3.85□□□□□ -1.79
Trim27Q62158 Gm34732-201ENSMUST00000195441 445 ntTSL 3 BASIC3.85□□□□□ -1.79
Trim27Q62158 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC3.85□□□□□ -1.79
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms