Protein–RNA interactions for Protein: Q61069

Usf1, Upstream stimulatory factor 1, mousemouse

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf1Q61069 AC158805.1-201ENSMUST00000218197 2631 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Olfr657-203ENSMUST00000215454 2397 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Gm22750-201ENSMUST00000102076 103 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Mir706-201ENSMUST00000102262 84 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Gm24120-201ENSMUST00000103978 129 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Gm12106-201ENSMUST00000116006 1200 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Gm14989-201ENSMUST00000120497 207 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Gm11229-201ENSMUST00000121993 437 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Serf1-202ENSMUST00000129014 543 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
Usf1Q61069 Gm25967-201ENSMUST00000157168 147 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 H3f3aos-202ENSMUST00000159740 229 ntTSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Gm10075-201ENSMUST00000162030 545 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Usf1Q61069 1700025F22Rik-202ENSMUST00000180678 658 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Usf1Q61069 Gm27342-201ENSMUST00000183530 109 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Gm36974-201ENSMUST00000194200 1071 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 1700108N06Rik-201ENSMUST00000196572 681 ntTSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Trav12-4-201ENSMUST00000200663 271 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Olfr965-202ENSMUST00000213335 1700 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Olfr665-204ENSMUST00000216971 3248 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Cyp3a61-ps1-201ENSMUST00000218470 592 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 AC153365.1-201ENSMUST00000219016 2031 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Usf1Q61069 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 AC122937.1-201ENSMUST00000226405 793 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 AC164100.1-201ENSMUST00000227214 508 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 4930524N10Rik-201ENSMUST00000082357 919 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Usf1Q61069 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Usf1Q61069 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC2.89□□□□□ -1.95
Usf1Q61069 Gm14910-201ENSMUST00000121037 1805 ntBASIC2.89□□□□□ -1.95
Usf1Q61069 Mgat4c-202ENSMUST00000120748 2603 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Usf1Q61069 Olfr679-204ENSMUST00000215704 5018 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Gm43875-201ENSMUST00000203319 2475 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm14416-201ENSMUST00000118630 2308 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Gm7739-201ENSMUST00000221131 1560 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm37158-201ENSMUST00000191652 5704 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm5362-201ENSMUST00000211968 3085 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC2.88□□□□□ -1.95
Usf1Q61069 Vmn1r-ps127-201ENSMUST00000118007 478 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm14238-201ENSMUST00000120227 323 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm3848-202ENSMUST00000151564 301 ntTSL 3 BASIC2.88□□□□□ -1.95
Usf1Q61069 Gm16311-201ENSMUST00000161939 702 ntTSL 3 BASIC2.88□□□□□ -1.95
Usf1Q61069 Mir3106-201ENSMUST00000175401 82 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm18667-201ENSMUST00000186523 484 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm28706-201ENSMUST00000186830 355 ntTSL 2 BASIC2.88□□□□□ -1.95
Usf1Q61069 Snhg14-208ENSMUST00000188262 687 ntTSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Gm38231-201ENSMUST00000192030 347 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm43043-201ENSMUST00000196579 412 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm44016-201ENSMUST00000203463 164 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm45146-201ENSMUST00000207108 221 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Gm45551-201ENSMUST00000211459 928 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Vmn1r-ps50-201ENSMUST00000216908 453 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 1700124M09Rik-201ENSMUST00000217047 305 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Usf1Q61069 Lrrd1-201ENSMUST00000044039 2951 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Usf1Q61069 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Usf1Q61069 Olfr1167-201ENSMUST00000099832 1100 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Usf1Q61069 Olfr592-203ENSMUST00000218618 5978 ntTSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Gm44846-201ENSMUST00000207127 3243 ntBASIC2.88□□□□□ -1.95
Usf1Q61069 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Olfr146-203ENSMUST00000214410 1651 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 Olfr1211-203ENSMUST00000213412 4173 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Usf1Q61069 AC153801.2-201ENSMUST00000219875 3372 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 AC124562.2-201ENSMUST00000223888 2313 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm8011-201ENSMUST00000172163 1751 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Usf1Q61069 Nlrp9a-202ENSMUST00000108387 3336 ntAPPRIS P4 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usf1Q61069 Trav14d-2-201ENSMUST00000103597 276 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usf1Q61069 Trav14n-2-201ENSMUST00000103623 276 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usf1Q61069 Mir344c-201ENSMUST00000103919 92 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 S100a5-201ENSMUST00000001049 422 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Usf1Q61069 Gm14125-201ENSMUST00000113442 680 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm7974-201ENSMUST00000117154 408 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm11577-201ENSMUST00000118030 737 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Snrpert-201ENSMUST00000121967 279 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm25270-201ENSMUST00000122606 138 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm22516-201ENSMUST00000158266 124 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm23583-201ENSMUST00000158533 289 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Vmn1r-ps151-201ENSMUST00000176956 982 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Vmn2r-ps114-201ENSMUST00000177016 1280 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm20651-201ENSMUST00000177219 329 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Trav14-2-202ENSMUST00000184874 276 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Usf1Q61069 Gm28141-201ENSMUST00000186676 342 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm29602-201ENSMUST00000186887 442 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Mir703-201ENSMUST00000197105 109 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Igkv13-82-201ENSMUST00000200308 346 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm19126-201ENSMUST00000207896 509 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Olfr581-ps1-201ENSMUST00000209214 556 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Olfr1059-ps1-201ENSMUST00000215214 586 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC2.87□□□□□ -1.95
Usf1Q61069 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC2.87□□□□□ -1.95
Usf1Q61069 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.87□□□□□ -1.95
Usf1Q61069 Vmn1r72-201ENSMUST00000053134 921 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 63.2 ms