Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm28390-201ENSMUST00000185212 700 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm29064-201ENSMUST00000187014 813 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm28623-201ENSMUST00000187219 192 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm20203-201ENSMUST00000192352 332 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm32447-201ENSMUST00000194265 697 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 D030025E07Rik-205ENSMUST00000198478 418 ntTSL 3 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 E330037G11Rik-201ENSMUST00000204295 1086 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm44611-201ENSMUST00000207507 355 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Olfr837-201ENSMUST00000212482 1040 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 AC167977.1-201ENSMUST00000221384 234 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 AC192334.2-201ENSMUST00000223087 1091 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Vmn1r75-201ENSMUST00000057229 918 ntAPPRIS P2 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm10042-201ENSMUST00000079884 78 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 4930512M02Rik-201ENSMUST00000081896 715 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm25147-201ENSMUST00000083030 105 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Clhc1-204ENSMUST00000208530 2062 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm14415-201ENSMUST00000118260 1578 ntBASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Mrpl1-203ENSMUST00000121477 1550 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm4567-202ENSMUST00000190554 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Gm10668-202ENSMUST00000191073 1581 ntAPPRIS P1 TSL 1 (best) BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Trim40Q3UWA4 Olfr1258-201ENSMUST00000102609 7007 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm14288-201ENSMUST00000109020 3438 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Trbv16-201ENSMUST00000103274 398 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm22591-201ENSMUST00000104243 106 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm11253-201ENSMUST00000118486 201 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm13082-201ENSMUST00000118877 561 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm14103-201ENSMUST00000119075 366 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Klrc2-204ENSMUST00000119533 717 ntAPPRIS P4 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm14945-201ENSMUST00000119556 1118 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm23463-201ENSMUST00000122468 99 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm5963-201ENSMUST00000143451 236 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm25666-201ENSMUST00000157702 107 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Mir7074-201ENSMUST00000183884 63 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Mir3620-201ENSMUST00000184710 61 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm28702-201ENSMUST00000188276 253 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm29263-201ENSMUST00000188718 463 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Npn2-202ENSMUST00000189275 235 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm6680-201ENSMUST00000192789 950 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm37617-201ENSMUST00000194309 159 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm43525-201ENSMUST00000196460 616 ntTSL 2 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm43729-201ENSMUST00000196949 499 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Igkv11-114-201ENSMUST00000200013 346 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm43227-201ENSMUST00000202239 677 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Olfr795-ps1-201ENSMUST00000205245 763 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 AC124542.1-201ENSMUST00000205588 908 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Scoc-204ENSMUST00000212449 280 ntTSL 3 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm7751-201ENSMUST00000212868 709 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm35548-201ENSMUST00000214348 441 ntTSL 5 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 AC126275.2-201ENSMUST00000225224 253 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 AC183092.2-201ENSMUST00000225542 1153 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 AC125523.1-201ENSMUST00000228018 934 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Znrd1as-201ENSMUST00000040177 976 ntAPPRIS P2 TSL 1 (best) BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 AC158979.1-201ENSMUST00000223594 2252 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm44120-201ENSMUST00000203022 3023 ntBASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
Trim40Q3UWA4 Gm14910-201ENSMUST00000121037 1805 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Vmn1r42-203ENSMUST00000227279 4138 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Olfr799-204ENSMUST00000216446 1513 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm18337-201ENSMUST00000219023 5762 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm24430-201ENSMUST00000104077 104 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm26418-201ENSMUST00000104275 137 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm12598-201ENSMUST00000117333 830 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm11913-201ENSMUST00000119094 336 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Slc7a12-202ENSMUST00000120484 1010 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Slc7a12-203ENSMUST00000120801 1069 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm24836-201ENSMUST00000122609 108 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm22310-201ENSMUST00000157509 116 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm22726-201ENSMUST00000158089 179 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm23269-201ENSMUST00000178701 107 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm26988-201ENSMUST00000183296 945 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm38075-201ENSMUST00000191979 920 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm18433-202ENSMUST00000195682 196 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm31230-201ENSMUST00000199725 785 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm44030-201ENSMUST00000204865 432 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm44748-201ENSMUST00000206040 658 ntTSL 5 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm44720-201ENSMUST00000206076 260 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm17991-201ENSMUST00000208139 297 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm44925-201ENSMUST00000208879 2110 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm45312-201ENSMUST00000210566 311 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 AC153971.2-201ENSMUST00000214553 777 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 AC153957.1-201ENSMUST00000215235 229 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 AC167192.4-201ENSMUST00000224087 993 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm26128-201ENSMUST00000083170 110 ntBASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm5800-201ENSMUST00000095916 903 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
Trim40Q3UWA4 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Trim40Q3UWA4 Olfr1129-203ENSMUST00000214773 2403 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 76.7 ms