Protein–RNA interactions for Protein: Q3U1J4

Ddb1, DNA damage-binding protein 1, mousemouse

Known RBP Predictions only

Length 1,140 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddb1Q3U1J4 Gm26460-201ENSMUST00000175061 126 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm22460-201ENSMUST00000175269 124 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm24365-201ENSMUST00000175384 125 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm44310-201ENSMUST00000175424 126 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm22639-201ENSMUST00000175591 125 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm24979-201ENSMUST00000178626 126 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm27743-201ENSMUST00000185136 126 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm29320-201ENSMUST00000185235 615 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm29179-202ENSMUST00000186138 615 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm29448-201ENSMUST00000186675 615 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm29314-201ENSMUST00000186800 615 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm28253-202ENSMUST00000187971 615 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm29169-201ENSMUST00000189835 615 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm28072-202ENSMUST00000190486 352 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm36953-201ENSMUST00000195295 268 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm31831-202ENSMUST00000198581 278 ntTSL 5 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm42604-201ENSMUST00000200077 801 ntTSL 3 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm44733-201ENSMUST00000208067 543 ntTSL 3 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm7753-201ENSMUST00000221007 867 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 CT573085.1-201ENSMUST00000224279 1197 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm10038-201ENSMUST00000077233 441 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Olfr747-201ENSMUST00000078075 955 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Rps17-201ENSMUST00000080813 494 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm25630-201ENSMUST00000084000 162 ntBASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Vmn1r72-202ENSMUST00000209638 6501 ntAPPRIS P1 TSL 3 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Ogt-201ENSMUST00000044475 5384 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Ddb1Q3U1J4 Gm37742-201ENSMUST00000193263 3979 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm7957-201ENSMUST00000207404 2602 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Olfr111-202ENSMUST00000214259 2620 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Fat3-205ENSMUST00000217308 18760 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm43751-201ENSMUST00000200275 3071 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm42606-201ENSMUST00000114209 239 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm14918-201ENSMUST00000118153 268 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm12902-201ENSMUST00000118389 322 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm12739-201ENSMUST00000119769 382 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm25883-201ENSMUST00000157781 271 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm26556-201ENSMUST00000180645 320 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm9892-201ENSMUST00000182415 992 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Mir7014-201ENSMUST00000183853 63 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm44521-201ENSMUST00000206469 217 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm2676-201ENSMUST00000207279 606 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm6462-201ENSMUST00000081488 304 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Mup5-201ENSMUST00000082287 925 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm23614-201ENSMUST00000082598 107 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm26869-201ENSMUST00000181241 3523 ntTSL 2 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Olfr33-202ENSMUST00000216312 2372 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Casp12-201ENSMUST00000027009 2649 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Olfr1037-204ENSMUST00000216886 1755 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Spata31d1c-201ENSMUST00000099427 3390 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Gm45262-201ENSMUST00000209917 1463 ntBASIC4.8□□□□□ -1.64
Ddb1Q3U1J4 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Olfr699-203ENSMUST00000216307 4193 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Olfr853-202ENSMUST00000213834 3888 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Olfr815-202ENSMUST00000216182 2881 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Dync2h1-204ENSMUST00000140466 14264 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm13340-201ENSMUST00000117219 1545 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm13803-201ENSMUST00000117547 489 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm12760-201ENSMUST00000117861 482 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm6274-201ENSMUST00000118173 797 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm6923-201ENSMUST00000118343 406 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm15231-201ENSMUST00000119174 447 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Olfr406-201ENSMUST00000133561 1101 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm8289-201ENSMUST00000144814 1182 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm12694-201ENSMUST00000149367 748 ntTSL 3 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm16064-201ENSMUST00000154997 464 ntTSL 2 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Ear-ps3-201ENSMUST00000168308 445 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Vmn1r-ps86-201ENSMUST00000174052 547 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm11168-201ENSMUST00000177722 684 ntAPPRIS P5 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm10719-203ENSMUST00000179272 675 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Ighv3-7-201ENSMUST00000193370 348 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 n-TSaga9-201ENSMUST00000197675 107 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm17906-201ENSMUST00000202480 901 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm6303-201ENSMUST00000210123 471 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm7540-201ENSMUST00000219764 926 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 AL645546.1-201ENSMUST00000225001 189 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Olfr1495-201ENSMUST00000061669 1089 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm10916-201ENSMUST00000080330 483 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm23970-201ENSMUST00000083319 107 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 Gm25859-201ENSMUST00000083710 91 ntBASIC4.79□□□□□ -1.64
Ddb1Q3U1J4 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 79.1 ms