Protein–RNA interactions for Protein: Q3TIX9

Usp39, U4/U6.U5 tri-snRNP-associated protein 2, mousemouse

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp39Q3TIX9 4930562D21Rik-201ENSMUST00000123894 1750 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 B830012L14Rik-201ENSMUST00000182785 4505 ntTSL 5 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Rmi1-202ENSMUST00000224479 4212 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Gm26733-201ENSMUST00000180846 2046 ntTSL 5 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Gm10647-201ENSMUST00000098612 2036 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Peli1-202ENSMUST00000101477 3703 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Usp39Q3TIX9 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC4.16□□□□□ -1.74
Usp39Q3TIX9 Gm42639-201ENSMUST00000197061 1871 ntBASIC4.15□□□□□ -1.74
Usp39Q3TIX9 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.15□□□□□ -1.74
Usp39Q3TIX9 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.15□□□□□ -1.74
Usp39Q3TIX9 Olfr235-206ENSMUST00000215407 2633 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Usp39Q3TIX9 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.74
Usp39Q3TIX9 Olfr1143-203ENSMUST00000111568 1970 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.74
Usp39Q3TIX9 Apool-202ENSMUST00000113415 783 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm14669-201ENSMUST00000118841 250 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm4912-201ENSMUST00000122212 1044 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Rap1gapos-201ENSMUST00000135358 471 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm8207-201ENSMUST00000171204 502 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm23191-201ENSMUST00000179147 107 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm21028-201ENSMUST00000179470 123 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm29031-201ENSMUST00000185316 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm29000-201ENSMUST00000185444 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm8296-201ENSMUST00000185597 524 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm28204-201ENSMUST00000185934 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm28290-201ENSMUST00000186505 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm28161-201ENSMUST00000186669 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm28749-209ENSMUST00000189599 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm4035-202ENSMUST00000190684 526 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm37757-201ENSMUST00000193072 210 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm37050-201ENSMUST00000193464 466 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm32447-201ENSMUST00000194265 697 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm33163-201ENSMUST00000194504 614 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm37459-202ENSMUST00000195007 563 ntTSL 3 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm44858-201ENSMUST00000207360 154 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm45434-201ENSMUST00000210550 293 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm45455-202ENSMUST00000211156 630 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm45735-201ENSMUST00000212779 319 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 AC164567.2-201ENSMUST00000219363 445 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 AC159621.1-201ENSMUST00000223249 163 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 AC122393.3-201ENSMUST00000226343 1059 ntBASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
Usp39Q3TIX9 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 2310001H17Rik-203ENSMUST00000181517 3981 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Sycp2-201ENSMUST00000081134 5717 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 4921539E11Rik-202ENSMUST00000097944 1683 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Ano5-201ENSMUST00000043944 7785 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Uty-205ENSMUST00000143286 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Igkv1-135-201ENSMUST00000103303 394 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm14714-201ENSMUST00000119743 439 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm16017-201ENSMUST00000119834 208 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm7363-201ENSMUST00000119883 399 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm12087-201ENSMUST00000121878 258 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm11403-201ENSMUST00000122195 369 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm22637-201ENSMUST00000158144 283 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm26362-201ENSMUST00000158865 315 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Il1rl1-205ENSMUST00000174335 1216 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Mir3066-201ENSMUST00000175296 83 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Vmn2r-ps116-201ENSMUST00000175997 126 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm20830-201ENSMUST00000178016 684 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Cypt14-201ENSMUST00000179096 508 ntAPPRIS P1 TSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm26180-201ENSMUST00000179942 107 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm21232-201ENSMUST00000182187 1006 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm27402-201ENSMUST00000183890 120 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm42500-201ENSMUST00000199898 517 ntTSL 3 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm43500-201ENSMUST00000201067 312 ntTSL 5 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm43440-201ENSMUST00000201957 729 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm43028-201ENSMUST00000202561 481 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm44145-201ENSMUST00000203711 172 ntTSL 3 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm39038-201ENSMUST00000206774 355 ntTSL 3 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm44765-201ENSMUST00000206927 601 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm44871-201ENSMUST00000207821 497 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm44853-201ENSMUST00000209070 250 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 1700061N14Rik-201ENSMUST00000212295 463 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm9616-201ENSMUST00000221154 781 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Gm23447-201ENSMUST00000082798 163 ntBASIC4.14□□□□□ -1.75
Usp39Q3TIX9 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.14□□□□□ -1.75
Retrieved 100 of 76,532 protein–RNA pairs in 113 ms