Protein–RNA interactions for Protein: Q2UY11

Col28a1, Collagen alpha-1(XXVIII) chain, mousemouse

Predictions only

Length 1,141 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col28a1Q2UY11 Gm23849-201ENSMUST00000083833 191 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm26316-201ENSMUST00000083886 191 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Rnu2-10-201ENSMUST00000084010 191 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Cdc27-203ENSMUST00000106962 3160 ntTSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 AC153563.1-202ENSMUST00000217695 1838 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm7237-201ENSMUST00000148435 1401 ntTSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 4932431L22Rik-201ENSMUST00000193456 3140 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Dst-203ENSMUST00000115104 23279 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Gm29968-201ENSMUST00000222815 1387 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Ecm2-201ENSMUST00000051504 3596 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
Col28a1Q2UY11 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Vmn2r48-201ENSMUST00000165611 2568 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Mir147-201ENSMUST00000102354 79 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm12173-201ENSMUST00000117622 273 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm14292-201ENSMUST00000118761 456 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm14852-201ENSMUST00000120065 647 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Nell1os-201ENSMUST00000134584 489 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm23782-201ENSMUST00000157939 120 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm27773-201ENSMUST00000184087 78 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm28146-201ENSMUST00000185517 701 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm28574-201ENSMUST00000185757 699 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm28397-201ENSMUST00000187970 699 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm29366-201ENSMUST00000190481 699 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm37658-201ENSMUST00000192672 315 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm37715-201ENSMUST00000193206 235 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm13266-203ENSMUST00000193364 421 ntTSL 3 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm38080-201ENSMUST00000194035 268 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm2676-201ENSMUST00000207279 606 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm18703-201ENSMUST00000215318 333 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 AC147240.1-201ENSMUST00000218767 431 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 9530051G07Rik-201ENSMUST00000127673 4414 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm3972-201ENSMUST00000173960 2861 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Gm43200-201ENSMUST00000200385 2161 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr392-202ENSMUST00000144724 3904 ntAPPRIS P1 TSL 2 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 AC167360.1-201ENSMUST00000222596 2494 ntBASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Olfr836-203ENSMUST00000215981 5046 ntAPPRIS ALT2 TSL 5 BASIC3.75□□□□□ -1.81
Col28a1Q2UY11 Nat1-201ENSMUST00000026677 1347 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Vmn1r47-202ENSMUST00000227229 6733 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Vmn1r47-204ENSMUST00000228680 6717 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm23424-201ENSMUST00000103889 110 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm13331-201ENSMUST00000117500 448 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm15231-201ENSMUST00000119174 447 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm13677-201ENSMUST00000120739 595 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm22479-201ENSMUST00000122566 81 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm13483-201ENSMUST00000123699 664 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm13092-201ENSMUST00000136346 260 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm13942-201ENSMUST00000136950 325 ntTSL 3 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm11234-201ENSMUST00000141030 845 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm23098-201ENSMUST00000157552 299 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm24014-201ENSMUST00000157728 157 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm23499-201ENSMUST00000157736 268 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm24930-201ENSMUST00000158315 83 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm24739-201ENSMUST00000158855 292 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Ear10-202ENSMUST00000163652 471 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm24810-201ENSMUST00000175317 70 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm27676-201ENSMUST00000183669 61 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Mir6345-201ENSMUST00000184286 128 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gml2-203ENSMUST00000188180 649 ntAPPRIS ALT2 TSL 1 (best) BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm29334-201ENSMUST00000190334 357 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm28267-201ENSMUST00000191093 265 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm37313-201ENSMUST00000191673 290 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm43853-201ENSMUST00000197162 301 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm43669-201ENSMUST00000198229 436 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm44468-201ENSMUST00000199516 105 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm19147-201ENSMUST00000199622 652 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm32780-201ENSMUST00000201402 540 ntTSL 3 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm44611-201ENSMUST00000207507 355 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm43154-210ENSMUST00000210190 1051 ntTSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Gm2829-201ENSMUST00000213121 499 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 AC162387.1-201ENSMUST00000213369 213 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 AC115878.1-201ENSMUST00000227247 334 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 AC139350.4-201ENSMUST00000228483 798 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 AC155167.1-201ENSMUST00000228931 614 ntBASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC3.74□□□□□ -1.81
Col28a1Q2UY11 Tas2r110-201ENSMUST00000082014 1002 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
Retrieved 100 of 76,532 protein–RNA pairs in 82.7 ms