Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Gm4596-201ENSMUST00000117197 442 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Sprr2f-201ENSMUST00000050397 609 ntAPPRIS P1 TSL 1 (best) BASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Olfr1226-204ENSMUST00000215987 3251 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm14882-201ENSMUST00000117216 218 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm12739-201ENSMUST00000119769 382 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm6374-201ENSMUST00000159051 788 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm25247-201ENSMUST00000175475 90 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm22565-201ENSMUST00000175540 69 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 AC139186.1-201ENSMUST00000197610 94 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Igkv15-97-201ENSMUST00000197637 339 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm44230-201ENSMUST00000203032 3550 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm6592-201ENSMUST00000115563 507 ntAPPRIS P1 TSL 5 BASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm14292-201ENSMUST00000118761 456 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm6797-201ENSMUST00000119440 512 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm22316-201ENSMUST00000158012 216 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Gm37837-201ENSMUST00000191743 604 ntBASIC1.17□□□□□ -2.22
Ush2AQ2QI47 1700095K22Rik-201ENSMUST00000206808 282 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Ush2AQ2QI47 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Igkv13-85-201ENSMUST00000114212 347 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm27044-201ENSMUST00000183033 796 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm27608-201ENSMUST00000184822 162 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 4930563F08Rik-201ENSMUST00000198640 515 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Tecrl-201ENSMUST00000053543 2350 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Obscn-202ENSMUST00000047441 24175 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Olfr181-204ENSMUST00000205986 1891 ntAPPRIS P1 TSL 2 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Vmn2r-ps66-201ENSMUST00000173203 1256 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm40662-201ENSMUST00000222208 453 ntTSL 5 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm40662-202ENSMUST00000222263 487 ntTSL 5 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm22866-201ENSMUST00000083947 177 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Olfr849-202ENSMUST00000217273 6140 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Fam46d-204ENSMUST00000167154 3004 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm11460-201ENSMUST00000118200 361 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm29429-201ENSMUST00000187071 121 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm44533-201ENSMUST00000207782 268 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm45130-201ENSMUST00000207574 3388 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm14897-201ENSMUST00000118213 207 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm13424-201ENSMUST00000122301 354 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm25910-201ENSMUST00000157620 140 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm16430-201ENSMUST00000169006 615 ntAPPRIS P1 TSL 3 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Scgb2b14-ps-201ENSMUST00000189424 336 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm6651-201ENSMUST00000189471 271 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm18433-201ENSMUST00000192747 197 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 4933438B17Rik-202ENSMUST00000196374 576 ntTSL 3 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 AC139350.4-201ENSMUST00000228483 798 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Gm24624-201ENSMUST00000082617 164 ntBASIC1.16□□□□□ -2.22
Ush2AQ2QI47 Vmn1r228-201ENSMUST00000072410 1443 ntAPPRIS P1 BASIC1.16□□□□□ -2.22
Ush2AQ2QI47 4932438A13Rik-217ENSMUST00000152564 15541 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Skint3-201ENSMUST00000038455 3627 ntAPPRIS P3 TSL 1 (best) BASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Gm8430-201ENSMUST00000119780 471 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Ear-ps12-201ENSMUST00000161720 451 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Gm6245-201ENSMUST00000164699 768 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Mir1954-201ENSMUST00000175595 86 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Gm38255-201ENSMUST00000194910 2996 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Gm42774-201ENSMUST00000198854 283 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 Gm44703-201ENSMUST00000205724 248 ntBASIC1.15□□□□□ -2.22
Ush2AQ2QI47 2010106E10Rik-201ENSMUST00000026602 1257 ntTSL 1 (best) BASIC1.15□□□□□ -2.22
Ush2AQ2QI47 n-R5s164-201ENSMUST00000122664 112 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm37479-201ENSMUST00000194169 3841 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Csmd3-201ENSMUST00000100670 13022 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Kcnb2-201ENSMUST00000170146 14845 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Cyp3a44-201ENSMUST00000067479 1962 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm3081-201ENSMUST00000193413 3025 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm7195-201ENSMUST00000190869 1707 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Snord71-201ENSMUST00000104361 85 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm24902-201ENSMUST00000158126 123 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 1700047N06Rik-201ENSMUST00000194474 920 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 AC160970.1-201ENSMUST00000219311 475 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 CT025577.1-201ENSMUST00000220862 2846 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Vmn1r-ps2-201ENSMUST00000118464 834 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm16566-201ENSMUST00000160387 910 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Mir3098-201ENSMUST00000175416 87 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 1700121L16Rik-201ENSMUST00000189166 561 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm17790-201ENSMUST00000191545 1228 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 4930437M23Rik-201ENSMUST00000197456 968 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm43358-201ENSMUST00000199217 970 ntTSL 1 (best) BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm42990-201ENSMUST00000199231 312 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm43131-201ENSMUST00000200042 969 ntTSL 5 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm20559-201ENSMUST00000201032 433 ntTSL 3 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm19233-201ENSMUST00000219772 936 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Olfr198-201ENSMUST00000064452 1054 ntAPPRIS P1 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Gm25038-201ENSMUST00000082928 130 ntBASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC1.15□□□□□ -2.23
Ush2AQ2QI47 Vmn1r43-205ENSMUST00000228709 12646 ntAPPRIS P1 BASIC1.14□□□□□ -2.23
Ush2AQ2QI47 Gm24098-201ENSMUST00000102075 109 ntBASIC1.14□□□□□ -2.23
Ush2AQ2QI47 Gm25381-201ENSMUST00000102078 109 ntBASIC1.14□□□□□ -2.23
Ush2AQ2QI47 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.14□□□□□ -2.23
Ush2AQ2QI47 Gm23760-201ENSMUST00000158350 116 ntBASIC1.14□□□□□ -2.23
Ush2AQ2QI47 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC1.14□□□□□ -2.23
Ush2AQ2QI47 Gm36377-201ENSMUST00000220833 757 ntTSL 2 BASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 187.6 ms