Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm15231-201ENSMUST00000119174 447 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm14647-201ENSMUST00000119392 680 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm14861-201ENSMUST00000119451 455 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm12704-201ENSMUST00000119789 464 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm22480-201ENSMUST00000122568 128 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm23168-201ENSMUST00000157156 143 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm25339-201ENSMUST00000157458 232 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm24857-201ENSMUST00000158061 310 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm3191-201ENSMUST00000167139 346 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 Vmn1r-ps59-201ENSMUST00000172698 199 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm28118-201ENSMUST00000185957 294 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm29408-201ENSMUST00000187536 216 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm28612-201ENSMUST00000189214 416 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox9Q04887 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm37743-201ENSMUST00000194645 376 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Gm44041-201ENSMUST00000203678 396 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 AC160124.1-201ENSMUST00000215539 519 ntTSL 2 BASIC4.54□□□□□ -1.68
Sox9Q04887 AC134254.5-201ENSMUST00000223436 400 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Olfr394-201ENSMUST00000071478 933 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sox9Q04887 n-R5s3-201ENSMUST00000083879 112 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 A530053G22Rik-201ENSMUST00000060147 1526 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm43896-201ENSMUST00000203440 2032 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Olfr1269-202ENSMUST00000214404 3535 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm14014-201ENSMUST00000156718 2717 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox9Q04887 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm2004-201ENSMUST00000109049 1749 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm14419-202ENSMUST00000126358 1749 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
Sox9Q04887 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.54□□□□□ -1.68
Sox9Q04887 Gm15773-201ENSMUST00000118665 1448 ntBASIC4.54□□□□□ -1.68
Sox9Q04887 Macf1-201ENSMUST00000082108 17331 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
Sox9Q04887 Ano5-203ENSMUST00000207717 2753 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Hfm1-201ENSMUST00000112690 5018 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm45854-201ENSMUST00000211857 3488 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm38010-201ENSMUST00000192592 2784 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Ighv1-34-201ENSMUST00000103512 388 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sox9Q04887 Traj25-201ENSMUST00000103716 57 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm23746-201ENSMUST00000104229 125 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm13550-201ENSMUST00000118185 525 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm14897-201ENSMUST00000118213 207 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm12803-201ENSMUST00000118907 821 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm14627-201ENSMUST00000118931 567 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm14008-201ENSMUST00000120483 274 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm11430-201ENSMUST00000121317 217 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm14765-201ENSMUST00000121954 326 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Rpl31-ps7-201ENSMUST00000180629 379 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 1700025F22Rik-204ENSMUST00000181567 578 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm7858-201ENSMUST00000190177 622 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm42453-201ENSMUST00000200477 409 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC4.53□□□□□ -1.68
Sox9Q04887 CT025606.1-201ENSMUST00000218273 324 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.53□□□□□ -1.68
Sox9Q04887 AC166358.7-201ENSMUST00000221132 108 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 AC125543.5-201ENSMUST00000222799 108 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 CT485612.2-201ENSMUST00000223014 151 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Prl-203ENSMUST00000224228 888 ntAPPRIS ALT2 BASIC4.53□□□□□ -1.68
Sox9Q04887 AC113031.3-201ENSMUST00000226552 190 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC4.53□□□□□ -1.68
Sox9Q04887 1700025F22Rik-201ENSMUST00000078770 650 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Olfr197-201ENSMUST00000080031 926 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Mir99a-201ENSMUST00000083596 65 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm3675-201ENSMUST00000175904 1653 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm37461-201ENSMUST00000193929 3704 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 Gm20139-202ENSMUST00000216041 3888 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
Sox9Q04887 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.53□□□□□ -1.68
Sox9Q04887 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC4.53□□□□□ -1.68
Sox9Q04887 Gm37879-201ENSMUST00000193112 1995 ntBASIC4.53□□□□□ -1.68
Sox9Q04887 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC4.53□□□□□ -1.69
Sox9Q04887 Gm42680-201ENSMUST00000196238 2500 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Vmn1r34-205ENSMUST00000227332 3075 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
Sox9Q04887 Vmn2r43-201ENSMUST00000066317 2849 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
Sox9Q04887 Ocrl-202ENSMUST00000115013 2910 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
Sox9Q04887 Snord116l9-201ENSMUST00000101891 94 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm26504-201ENSMUST00000102033 94 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm14401-201ENSMUST00000108968 247 ntTSL 5 BASIC4.52□□□□□ -1.69
Sox9Q04887 Gm11408-201ENSMUST00000117889 519 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm13085-201ENSMUST00000118356 171 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm11556-201ENSMUST00000120751 288 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm5391-201ENSMUST00000121155 613 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm26276-201ENSMUST00000157099 109 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm26045-201ENSMUST00000157862 97 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm22242-201ENSMUST00000175224 118 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Obox4-ps34-201ENSMUST00000175879 520 ntBASIC4.52□□□□□ -1.69
Sox9Q04887 Gm22258-201ENSMUST00000177645 94 ntBASIC4.52□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 84.5 ms