Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm29610-201ENSMUST00000187749 453 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm29522-201ENSMUST00000191530 621 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm37881-201ENSMUST00000193001 421 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm32033-201ENSMUST00000193483 339 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm45119-201ENSMUST00000207612 199 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm8745-201ENSMUST00000207846 782 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm45616-201ENSMUST00000211711 319 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 AC160863.1-201ENSMUST00000218412 317 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 AC131720.3-201ENSMUST00000219113 275 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 AC158606.1-201ENSMUST00000220078 325 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm22169-201ENSMUST00000083229 107 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm26263-201ENSMUST00000083281 164 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Fat1-206ENSMUST00000215588 13938 ntTSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Olfr1224-ps1-206ENSMUST00000216976 2019 ntAPPRIS P1 TSL 3 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a1Q04857 Olfr552-202ENSMUST00000215712 4206 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm42986-201ENSMUST00000201618 3385 ntBASIC5.07□□□□□ -1.6
Col6a1Q04857 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.07□□□□□ -1.6
Col6a1Q04857 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Vmn1r171-207ENSMUST00000227774 2867 ntAPPRIS ALT2 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr1185-ps1-201ENSMUST00000075025 3344 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm13518-201ENSMUST00000120018 233 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr1035-ps1-201ENSMUST00000120109 966 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm14564-201ENSMUST00000122159 294 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm22958-201ENSMUST00000122512 184 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm16068-201ENSMUST00000136557 504 ntTSL 3 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm11419-201ENSMUST00000150772 683 ntTSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm25386-201ENSMUST00000157814 288 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm9830-201ENSMUST00000178509 357 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm26960-201ENSMUST00000182263 412 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm29262-201ENSMUST00000190084 196 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm37338-201ENSMUST00000191986 127 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm44475-201ENSMUST00000204041 424 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr879-ps1-201ENSMUST00000212455 694 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 AL450317.1-201ENSMUST00000213941 291 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Rps24-205ENSMUST00000223999 525 ntAPPRIS ALT1 BASIC5.06□□□□□ -1.6
Col6a1Q04857 AC164437.2-201ENSMUST00000228915 797 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm23300-201ENSMUST00000082712 125 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 n-R5s160-201ENSMUST00000083096 120 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 n-R5s167-201ENSMUST00000083227 121 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Mir26a-2-201ENSMUST00000083496 84 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm5416-201ENSMUST00000089628 294 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a1Q04857 Dbpht2-202ENSMUST00000221311 5341 ntBASIC5.06□□□□□ -1.6
Col6a1Q04857 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Lin7c-201ENSMUST00000028583 4228 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr138-202ENSMUST00000172843 1769 ntAPPRIS P1 TSL 2 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr1263-202ENSMUST00000214382 4400 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Olfr481-202ENSMUST00000213601 5247 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
Col6a1Q04857 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm5248-201ENSMUST00000186108 4046 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm44435-201ENSMUST00000204379 4119 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm22831-201ENSMUST00000102473 109 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm13122-201ENSMUST00000118380 453 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm14566-201ENSMUST00000118915 321 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm12087-201ENSMUST00000121878 258 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm22345-201ENSMUST00000122644 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm24409-201ENSMUST00000157881 152 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm24584-201ENSMUST00000157972 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm8580-201ENSMUST00000160295 464 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm4222-201ENSMUST00000165784 470 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm24819-201ENSMUST00000175094 166 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Snora15-201ENSMUST00000177461 131 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm22286-201ENSMUST00000179708 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Ighv6-5-201ENSMUST00000179796 297 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Igkv12-40-201ENSMUST00000199208 347 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm42990-201ENSMUST00000199231 312 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm8132-201ENSMUST00000204938 640 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm45200-201ENSMUST00000207434 919 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm45499-201ENSMUST00000211656 280 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Nat1-202ENSMUST00000212171 1208 ntAPPRIS ALT1 TSL 5 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm45704-201ENSMUST00000212582 403 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Olfr1119-ps1-201ENSMUST00000215282 634 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm46997-201ENSMUST00000222108 217 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 AC100733.1-201ENSMUST00000228494 407 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Ssxa1-201ENSMUST00000072593 433 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
Col6a1Q04857 Olfr502-201ENSMUST00000078933 1059 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm6065-201ENSMUST00000081336 492 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm22749-201ENSMUST00000082490 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm24856-201ENSMUST00000082809 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm25258-201ENSMUST00000083049 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm24535-201ENSMUST00000083140 107 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Mir383-201ENSMUST00000083523 70 ntBASIC5.05□□□□□ -1.6
Col6a1Q04857 Gm22352-201ENSMUST00000083917 107 ntBASIC5.05□□□□□ -1.6
Retrieved 100 of 76,532 protein–RNA pairs in 96 ms