Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Zfp758-203ENSMUST00000121315 2860 ntAPPRIS P3 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Gm45697-201ENSMUST00000212893 2876 ntBASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Slco6d1-202ENSMUST00000160796 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Vmn1r39-203ENSMUST00000227285 2245 ntAPPRIS ALT2 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Slc39a12-202ENSMUST00000114731 2648 ntAPPRIS ALT2 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Zfp950-204ENSMUST00000143264 4825 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr653-202ENSMUST00000215585 4765 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Olfr653-203ENSMUST00000217466 4786 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
Col8a1Q00780 Zfp143-202ENSMUST00000169638 2914 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Olfr506-202ENSMUST00000209296 3228 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Nr1h5-201ENSMUST00000058899 2835 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Fastkd2-201ENSMUST00000027103 4486 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Clec5a-202ENSMUST00000101491 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Mtm1-213ENSMUST00000171933 3488 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Btf3l4-201ENSMUST00000102739 723 ntAPPRIS P1 TSL 3 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm11698-201ENSMUST00000117948 455 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm11742-201ENSMUST00000119903 233 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm7327-201ENSMUST00000120925 652 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm13725-201ENSMUST00000122139 207 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm15986-201ENSMUST00000122153 400 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm13748-201ENSMUST00000149820 378 ntTSL 2 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm24577-201ENSMUST00000158580 63 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm17023-201ENSMUST00000165885 448 ntTSL 2 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm20630-201ENSMUST00000177387 551 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 C4bp-ps1-201ENSMUST00000189393 706 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Trbv11-201ENSMUST00000194354 260 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm18384-201ENSMUST00000195974 808 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm42830-201ENSMUST00000196642 313 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm44859-201ENSMUST00000207831 94 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 AC171206.2-201ENSMUST00000215252 389 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 AC160635.2-201ENSMUST00000216368 734 ntTSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 AC121286.1-201ENSMUST00000218811 380 ntTSL 3 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm7117-201ENSMUST00000071515 387 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Olfr1340-201ENSMUST00000094834 951 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Olfr199-202ENSMUST00000214186 2728 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Olfr365-202ENSMUST00000213969 5333 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Olfr807-203ENSMUST00000217106 1788 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm42559-201ENSMUST00000201811 3532 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Tnpo1-201ENSMUST00000109399 8445 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC4.01□□□□□ -1.77
Col8a1Q00780 AC153532.3-201ENSMUST00000218660 3848 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
Col8a1Q00780 Gm15624-203ENSMUST00000204811 3402 ntBASIC4.01□□□□□ -1.77
Col8a1Q00780 Rbm44-201ENSMUST00000094698 3851 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Gm14295-202ENSMUST00000132883 2505 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 Gm42991-201ENSMUST00000196468 3837 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Olfr1178-202ENSMUST00000214040 6480 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Oog1-202ENSMUST00000222112 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Serpini1-201ENSMUST00000029423 4091 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Gm22831-201ENSMUST00000102473 109 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm15553-201ENSMUST00000118757 430 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm13867-201ENSMUST00000120844 395 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm17025-201ENSMUST00000133273 580 ntTSL 2 BASIC4□□□□□ -1.77
Col8a1Q00780 4933406D12Rik-201ENSMUST00000147212 737 ntTSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC4□□□□□ -1.77
Col8a1Q00780 Gm23121-201ENSMUST00000157653 173 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm24505-201ENSMUST00000157682 126 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm23354-201ENSMUST00000158426 104 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Obox4-ps8-201ENSMUST00000175831 714 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm21874-201ENSMUST00000178374 699 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col8a1Q00780 Gm24713-201ENSMUST00000178850 107 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm25448-201ENSMUST00000180065 107 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm28399-201ENSMUST00000186221 318 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm28572-201ENSMUST00000187444 318 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm29365-201ENSMUST00000189461 699 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm42666-201ENSMUST00000201954 152 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm36816-202ENSMUST00000205197 504 ntTSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 Gm45252-201ENSMUST00000211579 397 ntBASIC4□□□□□ -1.77
Col8a1Q00780 AC153938.2-201ENSMUST00000218388 580 ntTSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 AC156798.1-201ENSMUST00000220508 224 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm33654-201ENSMUST00000221704 215 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm22577-201ENSMUST00000083731 109 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm26165-201ENSMUST00000083791 138 ntBASIC4□□□□□ -1.77
Col8a1Q00780 mt-Nd4l-201ENSMUST00000084013 297 ntAPPRIS P1 BASIC4□□□□□ -1.77
Col8a1Q00780 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC4□□□□□ -1.77
Col8a1Q00780 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 Prkdc-201ENSMUST00000023352 12647 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
Col8a1Q00780 9130208D14Rik-201ENSMUST00000146911 7293 ntBASIC4□□□□□ -1.77
Col8a1Q00780 Gm35755-201ENSMUST00000222392 2077 ntBASIC3.99□□□□□ -1.77
Col8a1Q00780 Olfr1031-202ENSMUST00000216807 1946 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
Col8a1Q00780 Gm37192-201ENSMUST00000194479 1348 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 76,532 protein–RNA pairs in 87.2 ms