Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 Gm18982-201ENSMUST00000198118 529 ntBASIC3.24□□□□□ -1.89
Scn1bP97952 Lyrm1-209ENSMUST00000208424 888 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1bP97952 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.24□□□□□ -1.89
Scn1bP97952 AC140254.1-201ENSMUST00000220063 331 ntBASIC3.24□□□□□ -1.89
Scn1bP97952 Cdrt4-201ENSMUST00000035854 723 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1bP97952 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1bP97952 Efcab9-201ENSMUST00000054327 754 ntAPPRIS P2 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1bP97952 Gm26055-201ENSMUST00000083038 107 ntBASIC3.24□□□□□ -1.89
Scn1bP97952 n-R5s54-201ENSMUST00000083837 112 ntBASIC3.24□□□□□ -1.89
Scn1bP97952 Gm10704-201ENSMUST00000098952 730 ntBASIC3.24□□□□□ -1.89
Scn1bP97952 Samd9l-201ENSMUST00000120087 5330 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Scn1bP97952 Vmn1r219-204ENSMUST00000228113 5639 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Scn1bP97952 Gm14325-201ENSMUST00000108939 1576 ntAPPRIS P1 TSL 2 BASIC3.24□□□□□ -1.89
Scn1bP97952 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm23481-201ENSMUST00000104173 131 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm14657-201ENSMUST00000117461 302 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm13349-201ENSMUST00000118436 411 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm14899-201ENSMUST00000118673 548 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr1103-ps1-201ENSMUST00000119132 937 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm14411-201ENSMUST00000121798 914 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm16354-201ENSMUST00000155376 150 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm25391-201ENSMUST00000157342 134 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm24850-201ENSMUST00000158029 119 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm22889-201ENSMUST00000158639 58 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm7241-201ENSMUST00000159853 357 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm17064-201ENSMUST00000167690 452 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm4836-201ENSMUST00000179874 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm10096-202ENSMUST00000180207 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm10487-202ENSMUST00000180344 907 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm27520-201ENSMUST00000184872 81 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm28347-201ENSMUST00000185380 382 ntTSL 2 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm28384-201ENSMUST00000189079 463 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC3.23□□□□□ -1.89
Scn1bP97952 Tprkb-214ENSMUST00000202803 716 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm43924-201ENSMUST00000204851 1736 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr929-ps1-201ENSMUST00000216338 585 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm19786-201ENSMUST00000222589 580 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm7745-202ENSMUST00000222914 567 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr731-201ENSMUST00000059565 981 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr945-201ENSMUST00000076903 963 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm10058-201ENSMUST00000079797 893 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Olfr1241-201ENSMUST00000099778 945 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm43230-201ENSMUST00000200980 2129 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Gm6325-201ENSMUST00000122015 3114 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Zfp990-202ENSMUST00000105742 2996 ntAPPRIS P1 TSL 2 BASIC3.23□□□□□ -1.89
Scn1bP97952 CT025577.1-201ENSMUST00000220862 2846 ntBASIC3.23□□□□□ -1.89
Scn1bP97952 Acsm3-201ENSMUST00000063770 2651 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Vmn2r50-202ENSMUST00000086298 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.23□□□□□ -1.89
Scn1bP97952 Prl7d1-203ENSMUST00000224026 3657 ntAPPRIS P2 BASIC3.23□□□□□ -1.89
Scn1bP97952 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm24855-201ENSMUST00000104848 97 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm12125-201ENSMUST00000117261 736 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm16216-201ENSMUST00000118970 1111 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm12156-201ENSMUST00000119188 554 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm13873-201ENSMUST00000119208 427 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm14428-201ENSMUST00000120408 822 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm11389-201ENSMUST00000121407 430 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm25283-201ENSMUST00000157272 77 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm22211-201ENSMUST00000158097 156 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm25436-201ENSMUST00000158275 145 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm24503-201ENSMUST00000158454 135 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Fth-ps2-201ENSMUST00000168364 516 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Mir3066-201ENSMUST00000175296 83 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm25999-201ENSMUST00000175398 133 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Mir1251-201ENSMUST00000175486 84 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm23269-201ENSMUST00000178701 107 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm11168-204ENSMUST00000179881 672 ntAPPRIS ALT2 TSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm24137-201ENSMUST00000180055 79 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm22391-201ENSMUST00000180356 79 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm11394-201ENSMUST00000181421 517 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm18486-201ENSMUST00000184040 298 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm28619-201ENSMUST00000185889 622 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm29380-201ENSMUST00000185898 416 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm4854-201ENSMUST00000185902 574 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm28141-201ENSMUST00000186676 342 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Snhg14-207ENSMUST00000188162 770 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm28994-201ENSMUST00000188556 621 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 1700066N21Rik-201ENSMUST00000190123 783 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm36966-201ENSMUST00000192217 413 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm37000-201ENSMUST00000193058 428 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm37416-201ENSMUST00000193596 318 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm38363-202ENSMUST00000195029 622 ntTSL 5 BASIC3.22□□□□□ -1.89
Scn1bP97952 Gm44354-201ENSMUST00000196017 143 ntBASIC3.22□□□□□ -1.89
Scn1bP97952 Gm44282-201ENSMUST00000203199 190 ntBASIC3.22□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 109 ms