Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm6182-201ENSMUST00000156439 1208 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm8224-201ENSMUST00000166178 497 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm18727-201ENSMUST00000185981 553 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm37000-201ENSMUST00000193058 428 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm43601-201ENSMUST00000196294 945 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm43070-201ENSMUST00000196938 415 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm45530-201ENSMUST00000211658 225 ntBASIC3.56□□□□□ -1.84
NcanP55066 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.56□□□□□ -1.84
NcanP55066 AC154636.3-201ENSMUST00000221489 1214 ntBASIC3.56□□□□□ -1.84
NcanP55066 AC118639.1-204ENSMUST00000226401 694 ntBASIC3.56□□□□□ -1.84
NcanP55066 Sprr2h-201ENSMUST00000059845 752 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
NcanP55066 Olfr970-201ENSMUST00000071132 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NcanP55066 Olfr969-201ENSMUST00000074566 936 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NcanP55066 Gm24035-201ENSMUST00000082867 107 ntBASIC3.56□□□□□ -1.84
NcanP55066 Vmn1r80-202ENSMUST00000227205 10892 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
NcanP55066 D030040B21Rik-201ENSMUST00000181371 2788 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
NcanP55066 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
NcanP55066 1110015O18Rik-202ENSMUST00000183944 1533 ntTSL 3 BASIC3.55□□□□□ -1.84
NcanP55066 4930473O22Rik-201ENSMUST00000218283 1465 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Zfp988-201ENSMUST00000148762 2800 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Nlrp4b-202ENSMUST00000117413 3326 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm15127-203ENSMUST00000112753 1950 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Zbtb41-201ENSMUST00000039867 8361 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Vmn2r59-201ENSMUST00000168489 2598 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NcanP55066 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
NcanP55066 Gm24122-201ENSMUST00000104107 132 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm26387-201ENSMUST00000104238 132 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm12578-201ENSMUST00000121244 417 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Gm21814-201ENSMUST00000144085 291 ntTSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Gm9017-201ENSMUST00000159613 676 ntTSL 2 BASIC3.55□□□□□ -1.84
NcanP55066 Tmem29-211ENSMUST00000163233 1256 ntTSL 2 BASIC3.55□□□□□ -1.84
NcanP55066 Gm27893-201ENSMUST00000184408 194 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm28437-201ENSMUST00000190277 783 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm29389-201ENSMUST00000191562 352 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm42438-201ENSMUST00000197832 974 ntBASIC3.55□□□□□ -1.84
NcanP55066 Gm44050-201ENSMUST00000204263 527 ntBASIC3.55□□□□□ -1.84
NcanP55066 4930587E11Rik-202ENSMUST00000204857 807 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Gm29817-201ENSMUST00000210098 172 ntBASIC3.55□□□□□ -1.84
NcanP55066 Olfr580-ps1-201ENSMUST00000210528 943 ntBASIC3.55□□□□□ -1.84
NcanP55066 CT009550.5-201ENSMUST00000226286 382 ntBASIC3.55□□□□□ -1.84
NcanP55066 AC166369.3-201ENSMUST00000227286 409 ntBASIC3.55□□□□□ -1.84
NcanP55066 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Gm42483-201ENSMUST00000197556 1742 ntBASIC3.55□□□□□ -1.84
NcanP55066 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.55□□□□□ -1.84
NcanP55066 Ugp2-202ENSMUST00000102875 2683 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
NcanP55066 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
NcanP55066 Gm7470-201ENSMUST00000194219 2095 ntBASIC3.55□□□□□ -1.84
NcanP55066 AC132237.1-201ENSMUST00000220950 4475 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm37887-201ENSMUST00000192752 2716 ntBASIC3.54□□□□□ -1.84
NcanP55066 Mir582-201ENSMUST00000103758 81 ntBASIC3.54□□□□□ -1.84
NcanP55066 Mir669d-201ENSMUST00000104644 121 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm14322-201ENSMUST00000108942 1074 ntTSL 2 BASIC3.54□□□□□ -1.84
NcanP55066 Gm14125-201ENSMUST00000113442 680 ntBASIC3.54□□□□□ -1.84
NcanP55066 Olfr133-201ENSMUST00000113636 1090 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm14731-201ENSMUST00000119216 376 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm14322-202ENSMUST00000119838 1077 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NcanP55066 Gm13692-201ENSMUST00000120774 371 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm15142-201ENSMUST00000121013 856 ntBASIC3.54□□□□□ -1.84
NcanP55066 Olfr1001-ps1-201ENSMUST00000121340 945 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm14418-202ENSMUST00000128657 1077 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NcanP55066 Gm22947-201ENSMUST00000158559 91 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm24885-201ENSMUST00000158783 270 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
NcanP55066 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
NcanP55066 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
NcanP55066 Vmn1r-ps146-201ENSMUST00000176131 525 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21842-201ENSMUST00000177552 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC3.54□□□□□ -1.84
NcanP55066 Gm21626-201ENSMUST00000177791 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21562-201ENSMUST00000177888 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21539-201ENSMUST00000177925 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm17469-201ENSMUST00000177942 498 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm17693-201ENSMUST00000178004 498 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm17361-201ENSMUST00000178121 498 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm17522-201ENSMUST00000178144 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21599-201ENSMUST00000178249 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21616-201ENSMUST00000178416 498 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm21914-201ENSMUST00000178452 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm17584-201ENSMUST00000178471 498 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm21723-201ENSMUST00000178692 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21916-201ENSMUST00000178771 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21801-201ENSMUST00000178865 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21633-201ENSMUST00000178941 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm17267-201ENSMUST00000178952 499 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
NcanP55066 Gm21821-201ENSMUST00000179646 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21588-201ENSMUST00000180074 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21780-201ENSMUST00000180128 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21572-201ENSMUST00000180134 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21529-201ENSMUST00000180175 498 ntBASIC3.54□□□□□ -1.84
NcanP55066 Gm21960-201ENSMUST00000181924 452 ntBASIC3.54□□□□□ -1.84
NcanP55066 1700067G17Rik-201ENSMUST00000186180 603 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
NcanP55066 Gm29370-202ENSMUST00000187476 499 ntBASIC3.54□□□□□ -1.84
NcanP55066 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 88.7 ms