Protein–RNA interactions for Protein: P50431

Shmt1, Serine hydroxymethyltransferase, cytosolic, mousemouse

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt1P50431 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Slfn10-ps-201ENSMUST00000100716 3621 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 Rpl10-ps4-201ENSMUST00000117120 286 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm12787-201ENSMUST00000119234 396 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm11862-201ENSMUST00000119678 659 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm13737-201ENSMUST00000119793 232 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm9003-201ENSMUST00000121810 482 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Spink2-203ENSMUST00000121825 643 ntAPPRIS ALT2 TSL 3 BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm22345-201ENSMUST00000122644 107 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm11842-201ENSMUST00000130117 556 ntTSL 5 BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm23499-201ENSMUST00000157736 268 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm23579-201ENSMUST00000158528 103 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm23215-201ENSMUST00000178153 121 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm14419-204ENSMUST00000178182 192 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm2004-202ENSMUST00000178872 192 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm14295-203ENSMUST00000179435 192 ntTSL 5 BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm27760-201ENSMUST00000185048 114 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Ranbp2-ps10-201ENSMUST00000185097 385 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 4930452N14Rik-201ENSMUST00000189240 613 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 2810025M15Rik-203ENSMUST00000189791 251 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm29097-201ENSMUST00000190273 422 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm8939-201ENSMUST00000192577 964 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm38167-201ENSMUST00000195704 1178 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm44011-201ENSMUST00000203336 394 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm44041-201ENSMUST00000203678 396 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm44817-201ENSMUST00000205416 453 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm45814-201ENSMUST00000212646 775 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm29818-201ENSMUST00000218070 165 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC4.36□□□□□ -1.71
Shmt1P50431 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 AL672194.1-201ENSMUST00000224841 603 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Olfr769-201ENSMUST00000050915 1084 ntAPPRIS P1 BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm25579-201ENSMUST00000083407 106 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 Gm7381-201ENSMUST00000098958 300 ntBASIC4.36□□□□□ -1.71
Shmt1P50431 BB287469-201ENSMUST00000110149 1851 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm4027-201ENSMUST00000164838 1850 ntAPPRIS P1 TSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.36□□□□□ -1.71
Shmt1P50431 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.36□□□□□ -1.71
Shmt1P50431 Gm44532-201ENSMUST00000207723 2598 ntTSL 1 (best) BASIC4.36□□□□□ -1.71
Shmt1P50431 Olfr959-202ENSMUST00000215194 4339 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Shmt1P50431 Pkhd1l1-203ENSMUST00000209244 12949 ntAPPRIS P1 TSL 5 BASIC4.36□□□□□ -1.71
Shmt1P50431 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 Adam26a-201ENSMUST00000049577 2489 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Cep295-208ENSMUST00000161132 7605 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm20515-201ENSMUST00000174440 4824 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 Gprc6a-201ENSMUST00000020062 2856 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm15010-201ENSMUST00000117153 407 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm12765-201ENSMUST00000117273 615 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm13268-201ENSMUST00000117485 433 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm13567-201ENSMUST00000118026 247 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm9043-201ENSMUST00000119677 314 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm25224-201ENSMUST00000158195 68 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm24503-201ENSMUST00000158454 135 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm25156-201ENSMUST00000179809 79 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm28471-201ENSMUST00000185994 615 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 1700027A15Rik-203ENSMUST00000188793 423 ntTSL 3 BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm38044-201ENSMUST00000192964 487 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm43115-201ENSMUST00000196244 160 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm43853-201ENSMUST00000197162 301 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Mir129b-201ENSMUST00000197461 65 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm19908-201ENSMUST00000204684 391 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm45105-201ENSMUST00000207824 397 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm7675-201ENSMUST00000208828 686 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 AC159232.1-201ENSMUST00000222297 580 ntTSL 3 BASIC4.35□□□□□ -1.71
Shmt1P50431 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 Olfr308-201ENSMUST00000044256 1056 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Shmt1P50431 Olfr251-201ENSMUST00000072731 951 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Shmt1P50431 Olfr1490-201ENSMUST00000080162 951 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm25410-201ENSMUST00000083758 137 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC4.35□□□□□ -1.71
Shmt1P50431 Prl7a1-202ENSMUST00000095924 928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Fgf7-202ENSMUST00000110442 2287 ntAPPRIS P1 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Olfr709-ps1-202ENSMUST00000215468 5078 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC4.35□□□□□ -1.71
Shmt1P50431 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Olfr799-202ENSMUST00000213820 1627 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 Gm4724-201ENSMUST00000109045 1659 ntAPPRIS P1 TSL 2 BASIC4.35□□□□□ -1.71
Shmt1P50431 Olfr812-203ENSMUST00000205013 1718 ntAPPRIS P1 TSL 5 BASIC4.35□□□□□ -1.71
Shmt1P50431 AC123858.1-201ENSMUST00000226948 1874 ntBASIC4.35□□□□□ -1.71
Shmt1P50431 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC4.34□□□□□ -1.71
Shmt1P50431 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.34□□□□□ -1.71
Shmt1P50431 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm11448-201ENSMUST00000120427 450 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm14049-201ENSMUST00000121009 636 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm16230-201ENSMUST00000155550 521 ntTSL 3 BASIC4.34□□□□□ -1.71
Shmt1P50431 4930511O05Rik-201ENSMUST00000155912 391 ntTSL 1 (best) BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm25339-201ENSMUST00000157458 232 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Gm16572-201ENSMUST00000160258 279 ntTSL 3 BASIC4.34□□□□□ -1.71
Shmt1P50431 Gm7925-201ENSMUST00000166690 401 ntBASIC4.34□□□□□ -1.71
Shmt1P50431 Zfp456-202ENSMUST00000172266 679 ntTSL 3 BASIC4.34□□□□□ -1.71
Shmt1P50431 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC4.34□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 81.9 ms