Protein–RNA interactions for Protein: P43680

Sox18, Transcription factor SOX-18, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox18P43680 Mrgprb1-201ENSMUST00000094384 4185 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
Sox18P43680 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Lama2-207ENSMUST00000189575 4244 ntTSL 5 BASIC5.18□□□□□ -1.58
Sox18P43680 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Olfr684-202ENSMUST00000215552 3174 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox18P43680 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox18P43680 Vmn1r9-202ENSMUST00000227399 6778 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
Sox18P43680 Gm20619-201ENSMUST00000175814 2008 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Gm37226-201ENSMUST00000191644 3255 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm22020-201ENSMUST00000104358 136 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm11699-201ENSMUST00000119016 401 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm14748-201ENSMUST00000119819 411 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm9003-201ENSMUST00000121810 482 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm23982-201ENSMUST00000157141 106 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm24905-201ENSMUST00000158129 104 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Ulbp1-202ENSMUST00000177585 3815 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Gm27760-201ENSMUST00000185048 114 ntBASIC5.18□□□□□ -1.58
Sox18P43680 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC5.18□□□□□ -1.58
Sox18P43680 AC091783.5-201ENSMUST00000224928 671 ntBASIC5.18□□□□□ -1.58
Sox18P43680 AC123533.1-201ENSMUST00000227782 446 ntBASIC5.18□□□□□ -1.58
Sox18P43680 AC155634.1-201ENSMUST00000221687 2706 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Vmn2r100-201ENSMUST00000166081 2553 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox18P43680 Gm42659-201ENSMUST00000196955 1754 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Clec2g-203ENSMUST00000142388 2404 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Gm43857-201ENSMUST00000200343 3079 ntBASIC5.18□□□□□ -1.58
Sox18P43680 Slc7a2-203ENSMUST00000117077 7626 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Ahnak-202ENSMUST00000092956 18099 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox18P43680 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Fgf7-201ENSMUST00000064794 2672 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
Sox18P43680 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Sox18P43680 Stau2-213ENSMUST00000159558 3901 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm44235-201ENSMUST00000204312 3058 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Gnal-202ENSMUST00000076605 5223 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Tdrd12-204ENSMUST00000193633 3651 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox18P43680 Vmn1r34-203ENSMUST00000226910 2982 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox18P43680 Olfr983-202ENSMUST00000213087 6196 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm42923-201ENSMUST00000198438 2896 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Kat6b-ps1-201ENSMUST00000187624 3433 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Mir147-201ENSMUST00000102354 79 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm22899-201ENSMUST00000104540 131 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm12550-201ENSMUST00000118478 329 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Defa-ps11-201ENSMUST00000119719 299 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm13737-201ENSMUST00000119793 232 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Rps11-ps2-201ENSMUST00000121547 456 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm12150-201ENSMUST00000130874 468 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm25863-201ENSMUST00000158249 329 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm16146-201ENSMUST00000160306 439 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Gm16114-201ENSMUST00000161930 300 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm27834-201ENSMUST00000183427 125 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm29218-205ENSMUST00000190846 615 ntBASIC5.17□□□□□ -1.58
Sox18P43680 1700063I16Rik-201ENSMUST00000194611 611 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm44208-201ENSMUST00000205199 421 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm45007-201ENSMUST00000206237 366 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gm45355-201ENSMUST00000211342 296 ntTSL 3 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm45778-201ENSMUST00000211959 153 ntBASIC5.17□□□□□ -1.58
Sox18P43680 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Sox18P43680 n-R5s65-201ENSMUST00000082614 117 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Gcnt1-201ENSMUST00000169897 4594 ntAPPRIS P1 TSL 3 BASIC5.17□□□□□ -1.58
Sox18P43680 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Gm18757-201ENSMUST00000207938 3141 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Pik3c2g-202ENSMUST00000087657 3303 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm12185-201ENSMUST00000059930 5252 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC5.17□□□□□ -1.58
Sox18P43680 Gm42781-201ENSMUST00000201317 2719 ntBASIC5.17□□□□□ -1.58
Sox18P43680 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Sox18P43680 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox18P43680 Mtus1-203ENSMUST00000093534 4148 ntAPPRIS P4 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox18P43680 Vmn1r71-209ENSMUST00000228526 5137 ntAPPRIS P2 BASIC5.16□□□□□ -1.58
Sox18P43680 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC5.16□□□□□ -1.58
Sox18P43680 Gm15097-202ENSMUST00000112741 1953 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
Sox18P43680 Zfp78-206ENSMUST00000208390 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox18P43680 Ros1-201ENSMUST00000020045 7401 ntAPPRIS P2 TSL 1 (best) BASIC5.16□□□□□ -1.58
Sox18P43680 Gm14324-201ENSMUST00000121358 3051 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Kcnj1-202ENSMUST00000172015 3075 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Sox18P43680 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Sox18P43680 Mir19b-1-201ENSMUST00000102301 87 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Igkv6-13-201ENSMUST00000103395 287 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Sox18P43680 Gm22496-201ENSMUST00000104493 88 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Gm11912-201ENSMUST00000117235 264 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Gm15400-201ENSMUST00000118944 601 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Gm13873-201ENSMUST00000119208 427 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Gm12237-201ENSMUST00000120158 470 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Gm23902-201ENSMUST00000157571 134 ntBASIC5.16□□□□□ -1.58
Sox18P43680 Gm22767-201ENSMUST00000158365 165 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 82.5 ms