Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Gm25168-201ENSMUST00000104189 132 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Vmn1r3-201ENSMUST00000105159 1011 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
Nckap1P28660 Gm2318-201ENSMUST00000119623 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm2768-201ENSMUST00000121062 250 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm11389-201ENSMUST00000121407 430 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm12412-201ENSMUST00000121867 328 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm22769-201ENSMUST00000158367 98 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm23583-201ENSMUST00000158533 289 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm23505-201ENSMUST00000158989 130 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7438-201ENSMUST00000177664 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7408-201ENSMUST00000178014 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7386-201ENSMUST00000178020 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm3657-201ENSMUST00000178170 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7415-201ENSMUST00000178205 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7398-201ENSMUST00000178589 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7391-201ENSMUST00000178680 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm7375-201ENSMUST00000179232 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm3681-201ENSMUST00000179940 639 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm28560-201ENSMUST00000186091 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm28334-201ENSMUST00000186653 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm17929-201ENSMUST00000186851 627 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
Nckap1P28660 Gm20822-202ENSMUST00000188422 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nckap1P28660 Gm28495-201ENSMUST00000188452 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm28232-201ENSMUST00000188683 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm28481-201ENSMUST00000189231 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm20828-202ENSMUST00000190516 1229 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nckap1P28660 Gm29059-201ENSMUST00000191534 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm37765-201ENSMUST00000192395 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm37237-201ENSMUST00000192893 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Ighv1-28-201ENSMUST00000192987 351 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm36968-201ENSMUST00000193737 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm37987-201ENSMUST00000194999 825 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm38290-201ENSMUST00000195238 315 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC3.32□□□□□ -1.88
Nckap1P28660 Gm44076-201ENSMUST00000203072 520 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm43932-201ENSMUST00000204499 52 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm35876-201ENSMUST00000205044 459 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm34662-201ENSMUST00000220502 215 ntTSL 3 BASIC3.32□□□□□ -1.88
Nckap1P28660 AC154224.1-201ENSMUST00000224367 403 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Defb14-201ENSMUST00000052601 204 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nckap1P28660 Gm9845-201ENSMUST00000056409 598 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm23448-201ENSMUST00000083151 104 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Gm38699-201ENSMUST00000221301 1740 ntBASIC3.32□□□□□ -1.88
Nckap1P28660 Olfr513-202ENSMUST00000214670 2029 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nckap1P28660 Ms4a14-201ENSMUST00000187467 4065 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
Nckap1P28660 Cfh-202ENSMUST00000111976 4365 ntAPPRIS P2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nckap1P28660 Cfh-201ENSMUST00000066859 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
Nckap1P28660 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nckap1P28660 Gm4855-201ENSMUST00000192270 1967 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm7135-202ENSMUST00000191257 1905 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm25213-201ENSMUST00000102388 113 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm13803-201ENSMUST00000117547 489 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm14669-201ENSMUST00000118841 250 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm14810-201ENSMUST00000121628 486 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm24241-201ENSMUST00000157787 145 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm23145-201ENSMUST00000178912 79 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm28675-201ENSMUST00000191096 675 ntTSL 5 BASIC3.31□□□□□ -1.88
Nckap1P28660 Gm37085-201ENSMUST00000193780 196 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 E330011O21Rik-203ENSMUST00000210555 455 ntTSL 5 BASIC3.31□□□□□ -1.88
Nckap1P28660 CT010455.1-201ENSMUST00000218579 413 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC3.31□□□□□ -1.88
Nckap1P28660 CT573085.1-201ENSMUST00000224279 1197 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm23516-201ENSMUST00000093728 107 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Olfr689-201ENSMUST00000098153 1076 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
Nckap1P28660 Gm3259-201ENSMUST00000101015 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
Nckap1P28660 Olfr918-202ENSMUST00000215461 3783 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
Nckap1P28660 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Gm17976-201ENSMUST00000184037 1909 ntBASIC3.31□□□□□ -1.88
Nckap1P28660 Olfr881-202ENSMUST00000212489 4237 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Nckap1P28660 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nckap1P28660 Zfp534-201ENSMUST00000117638 2885 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Nckap1P28660 B020011L13Rik-201ENSMUST00000188801 2879 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
Nckap1P28660 Olfr361-202ENSMUST00000214969 2749 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC3.3□□□□□ -1.88
Nckap1P28660 Fam71d-205ENSMUST00000219551 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm37645-201ENSMUST00000194285 3556 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nckap1P28660 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm37848-201ENSMUST00000195288 3103 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Mir582-201ENSMUST00000103758 81 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Gm25308-201ENSMUST00000104171 158 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Rpl31-ps5-201ENSMUST00000118086 375 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Hmgb1-ps6-201ENSMUST00000119503 616 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Gm14128-201ENSMUST00000119514 1011 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Xlr4e-ps-201ENSMUST00000122102 648 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Gm14253-201ENSMUST00000122112 639 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Gm11337-201ENSMUST00000144770 335 ntTSL 2 BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm25490-201ENSMUST00000158734 130 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 1700016C15Rik-201ENSMUST00000016106 768 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm4540-201ENSMUST00000170669 429 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Clec5a-204ENSMUST00000177178 665 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC3.3□□□□□ -1.88
Nckap1P28660 1810022K09Rik-203ENSMUST00000185423 278 ntTSL 3 BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm28384-201ENSMUST00000189079 463 ntBASIC3.3□□□□□ -1.88
Nckap1P28660 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC3.3□□□□□ -1.88
Nckap1P28660 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC3.3□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 101.5 ms