Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm44988-201ENSMUST00000203835 1161 ntBASIC2.89□□□□□ -1.95
Col2a1P28481 Gm44724-202ENSMUST00000208251 531 ntTSL 5 BASIC2.89□□□□□ -1.95
Col2a1P28481 Scoc-209ENSMUST00000212905 798 ntAPPRIS P3 TSL 3 BASIC2.89□□□□□ -1.95
Col2a1P28481 CT573422.1-201ENSMUST00000216655 405 ntBASIC2.89□□□□□ -1.95
Col2a1P28481 Olfr907-201ENSMUST00000052901 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Col2a1P28481 C2cd6b-201ENSMUST00000054653 878 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
Col2a1P28481 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
Col2a1P28481 Pcdh11x-206ENSMUST00000192677 9097 ntAPPRIS ALT2 TSL 5 BASIC2.88□□□□□ -1.95
Col2a1P28481 Gm5583-201ENSMUST00000174328 1519 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm37063-201ENSMUST00000194678 3520 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col2a1P28481 Olfr681-205ENSMUST00000216247 4729 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
Col2a1P28481 Gm44947-201ENSMUST00000208462 1981 ntTSL 5 BASIC2.88□□□□□ -1.95
Col2a1P28481 Gm24120-201ENSMUST00000103978 129 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC2.88□□□□□ -1.95
Col2a1P28481 Gm16383-201ENSMUST00000118122 232 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col2a1P28481 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm12042-201ENSMUST00000120479 301 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm12880-201ENSMUST00000120652 494 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm14800-201ENSMUST00000122084 1272 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm23867-201ENSMUST00000122649 274 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm24212-201ENSMUST00000158258 132 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm16584-201ENSMUST00000159267 189 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm20407-201ENSMUST00000172891 598 ntTSL 3 BASIC2.88□□□□□ -1.95
Col2a1P28481 Gm27330-201ENSMUST00000184689 132 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Mir7226-201ENSMUST00000184953 60 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm28925-201ENSMUST00000188586 168 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm21006-201ENSMUST00000196930 667 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Gm18000-201ENSMUST00000212153 800 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
Col2a1P28481 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
Col2a1P28481 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 AC154681.1-201ENSMUST00000225876 1735 ntBASIC2.88□□□□□ -1.95
Col2a1P28481 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
Col2a1P28481 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.87□□□□□ -1.95
Col2a1P28481 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col2a1P28481 4933413L06Rik-201ENSMUST00000110292 809 ntTSL 2 BASIC2.87□□□□□ -1.95
Col2a1P28481 Gm14833-201ENSMUST00000118345 1027 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Gm15936-201ENSMUST00000118706 460 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Gm25557-201ENSMUST00000158084 315 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC2.87□□□□□ -1.95
Col2a1P28481 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Gm37213-201ENSMUST00000193077 586 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Gm38213-201ENSMUST00000193203 173 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Gm18026-201ENSMUST00000222789 727 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 AC118639.1-201ENSMUST00000227204 338 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Olfr815-201ENSMUST00000071557 951 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col2a1P28481 Stfa2l1-201ENSMUST00000079184 414 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col2a1P28481 Olfr814-201ENSMUST00000081367 933 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col2a1P28481 Gm24319-201ENSMUST00000083389 107 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC2.87□□□□□ -1.95
Col2a1P28481 Olfr1037-203ENSMUST00000216020 1359 ntAPPRIS P1 TSL 3 BASIC2.87□□□□□ -1.95
Col2a1P28481 Gm10997-201ENSMUST00000210294 1500 ntBASIC2.87□□□□□ -1.95
Col2a1P28481 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
Col2a1P28481 Hsf3-205ENSMUST00000179832 1972 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
Col2a1P28481 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.87□□□□□ -1.95
Col2a1P28481 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col2a1P28481 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm42537-201ENSMUST00000198260 2574 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Olfr910-201ENSMUST00000215122 1996 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm45483-201ENSMUST00000209845 1682 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Olfr299-202ENSMUST00000217253 4479 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
Col2a1P28481 Trbv30-201ENSMUST00000103282 332 ntAPPRIS ALT2 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm1330-202ENSMUST00000109942 555 ntAPPRIS ALT2 TSL 5 BASIC2.86□□□□□ -1.95
Col2a1P28481 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm14843-201ENSMUST00000119596 212 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm14989-201ENSMUST00000120497 207 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm14977-201ENSMUST00000121626 812 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Klra17-202ENSMUST00000122219 1167 ntAPPRIS P1 TSL 1 (best) BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm3669-202ENSMUST00000127852 397 ntTSL 3 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm2101-201ENSMUST00000128191 397 ntTSL 3 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm2165-205ENSMUST00000155337 397 ntTSL 3 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm16232-201ENSMUST00000162856 167 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm9890-201ENSMUST00000171867 537 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
Col2a1P28481 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC2.86□□□□□ -1.95
Col2a1P28481 Gm29516-201ENSMUST00000190402 468 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm44300-201ENSMUST00000196792 121 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm44061-201ENSMUST00000203962 1195 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm9377-201ENSMUST00000207227 623 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Calml4-204ENSMUST00000214633 394 ntTSL 3 BASIC2.86□□□□□ -1.95
Col2a1P28481 CT009733.1-201ENSMUST00000225322 425 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 AC167977.2-201ENSMUST00000225676 682 ntBASIC2.86□□□□□ -1.95
Col2a1P28481 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Olfr617-202ENSMUST00000215755 3000 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
Col2a1P28481 Gm15159-201ENSMUST00000117062 764 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Gm11285-201ENSMUST00000118443 322 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Gm14253-201ENSMUST00000122112 639 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Gm15130-201ENSMUST00000132464 663 ntAPPRIS P1 TSL 3 BASIC2.85□□□□□ -1.95
Col2a1P28481 Gm23585-201ENSMUST00000157656 102 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Gm17555-201ENSMUST00000164042 1113 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
Col2a1P28481 Mir3569-201ENSMUST00000185080 58 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 1700063A18Rik-201ENSMUST00000190901 356 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
Col2a1P28481 Gm37576-201ENSMUST00000194228 372 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Gm19418-201ENSMUST00000197436 580 ntBASIC2.85□□□□□ -1.95
Col2a1P28481 Gm42796-201ENSMUST00000199913 1087 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 83.7 ms