Protein–RNA interactions for Protein: P28357

Hoxd9, Homeobox protein Hox-D9, mousemouse

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd9P28357 Gm24567-201ENSMUST00000179294 121 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm23943-201ENSMUST00000179712 121 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm25228-201ENSMUST00000180121 121 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm23304-201ENSMUST00000180209 121 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm28920-201ENSMUST00000189957 699 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm9134-201ENSMUST00000193186 551 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm10048-201ENSMUST00000194196 372 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm44720-201ENSMUST00000206076 260 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 AC134537.2-201ENSMUST00000217770 575 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 S100a11-201ENSMUST00000029515 511 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm26446-201ENSMUST00000082455 103 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm25260-201ENSMUST00000083053 134 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Kncn-201ENSMUST00000097918 951 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm44751-201ENSMUST00000208302 4387 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd9P28357 Zfp975-201ENSMUST00000107992 3148 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd9P28357 Gm14914-201ENSMUST00000117576 2031 ntBASIC4.8□□□□□ -1.64
Hoxd9P28357 Pcsk2os2-201ENSMUST00000153878 3370 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd9P28357 Ankrd12-201ENSMUST00000038116 8991 ntAPPRIS P1 TSL 5 BASIC4.8□□□□□ -1.64
Hoxd9P28357 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
Hoxd9P28357 Vmn1r71-210ENSMUST00000228561 4747 ntAPPRIS ALT2 BASIC4.8□□□□□ -1.64
Hoxd9P28357 Bmp15-201ENSMUST00000024049 3060 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr372-202ENSMUST00000215324 3542 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr109-202ENSMUST00000214668 5861 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr622-202ENSMUST00000213536 2219 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Trav7n-4-201ENSMUST00000103609 341 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm15426-201ENSMUST00000117823 556 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm15603-201ENSMUST00000119252 492 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm13541-201ENSMUST00000119519 283 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm13787-201ENSMUST00000120422 168 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm13901-201ENSMUST00000137252 468 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm26287-201ENSMUST00000158887 81 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm26291-201ENSMUST00000158889 137 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 Mir5103-201ENSMUST00000175111 79 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm24304-201ENSMUST00000177635 107 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm24264-201ENSMUST00000179835 94 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gtpbp4-ps4-201ENSMUST00000184813 258 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm28304-201ENSMUST00000185977 312 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm29256-201ENSMUST00000189094 312 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm28484-201ENSMUST00000190606 312 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Gm37878-201ENSMUST00000192108 387 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 BX530055.1-201ENSMUST00000197285 122 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 AC161114.1-201ENSMUST00000218223 474 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 CT025689.3-201ENSMUST00000223817 301 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Ear-ps9-202ENSMUST00000226796 245 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 AC126440.1-201ENSMUST00000227098 349 ntBASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr133-203ENSMUST00000215078 3130 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 Ktn1-216ENSMUST00000189533 3941 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr1260-202ENSMUST00000111512 4226 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Vmn1r200-205ENSMUST00000228726 5525 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr785-201ENSMUST00000204402 2014 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Hoxd9P28357 Olfr18-203ENSMUST00000212943 2896 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Hoxd9P28357 Tmem67-201ENSMUST00000050686 3456 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd9P28357 Vmn1r171-211ENSMUST00000228559 2637 ntAPPRIS ALT2 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxd9P28357 AC108802.1-201ENSMUST00000219501 3142 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Clvs1-202ENSMUST00000108348 3526 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm43130-201ENSMUST00000197721 3907 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm15846-201ENSMUST00000116022 320 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm23178-201ENSMUST00000116782 95 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm22488-201ENSMUST00000116811 127 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm15037-201ENSMUST00000120358 259 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm24594-201ENSMUST00000122502 99 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm15905-201ENSMUST00000137042 298 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm13601-201ENSMUST00000142314 404 ntTSL 3 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm25383-201ENSMUST00000157810 144 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm22804-201ENSMUST00000158052 101 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm24168-201ENSMUST00000178825 107 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm5329-201ENSMUST00000186898 463 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm28468-201ENSMUST00000188536 615 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm28978-201ENSMUST00000191120 615 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Mir7661-201ENSMUST00000197023 61 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm43407-201ENSMUST00000199816 317 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm42578-201ENSMUST00000199960 194 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm45403-201ENSMUST00000209453 276 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm45710-201ENSMUST00000212847 215 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm5750-201ENSMUST00000218711 801 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 9430078K24Rik-202ENSMUST00000219857 348 ntTSL 3 BASIC4.78□□□□□ -1.64
Hoxd9P28357 AC166358.4-201ENSMUST00000223030 105 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Olfr470-201ENSMUST00000073059 945 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Mir181b-2-201ENSMUST00000083644 89 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.78□□□□□ -1.64
Hoxd9P28357 Cdh7-208ENSMUST00000146282 4776 ntTSL 3 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Hoxd9P28357 Evi2-202ENSMUST00000170422 3944 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Hoxd9P28357 Gm29112-201ENSMUST00000188962 3487 ntBASIC4.78□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 103.1 ms