Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm18729-201ENSMUST00000217230 621 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 AC147639.1-201ENSMUST00000224216 661 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 AC154598.1-201ENSMUST00000227079 347 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 CT030684.2-201ENSMUST00000228946 826 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Tshb-201ENSMUST00000029450 605 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm4987-201ENSMUST00000078326 408 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm24622-201ENSMUST00000082619 162 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Gm25008-201ENSMUST00000083809 81 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Olfr68-202ENSMUST00000216811 4093 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sdc1P18828 Gm44742-201ENSMUST00000207190 1412 ntBASIC2.5□□□□□ -2.01
Sdc1P18828 Olfr807-202ENSMUST00000213379 1866 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Sdc1P18828 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Nexn-207ENSMUST00000198460 1785 ntAPPRIS ALT2 TSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm7869-201ENSMUST00000121457 1322 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Olfr1161-202ENSMUST00000214438 3675 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm22758-201ENSMUST00000102275 96 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Snord66-201ENSMUST00000104051 75 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Mir878-201ENSMUST00000104680 78 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm14931-201ENSMUST00000111079 253 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm8569-201ENSMUST00000117630 647 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm7219-201ENSMUST00000119619 297 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm14411-201ENSMUST00000121798 914 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm22755-201ENSMUST00000157143 100 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm22390-201ENSMUST00000157588 325 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm24532-201ENSMUST00000157951 286 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm8338-201ENSMUST00000163928 363 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm5967-201ENSMUST00000172723 494 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm22853-201ENSMUST00000174974 131 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm24757-201ENSMUST00000176987 371 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Rpl31-ps18-201ENSMUST00000180885 377 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm27235-201ENSMUST00000184431 903 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc1P18828 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC2.49□□□□□ -2.01
Sdc1P18828 1700027A15Rik-205ENSMUST00000191122 332 ntTSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm19066-201ENSMUST00000193232 1078 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Igkv13-57-2-201ENSMUST00000196590 336 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Igkv9-128-201ENSMUST00000196602 353 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm19147-201ENSMUST00000199622 652 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm28563-201ENSMUST00000201179 211 ntTSL 3 BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm44600-201ENSMUST00000208540 111 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 AC153979.1-201ENSMUST00000219684 242 ntTSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 AC155929.1-201ENSMUST00000220217 1276 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 CT009765.2-201ENSMUST00000221331 392 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Gm46436-201ENSMUST00000221851 1294 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 AC154305.1-201ENSMUST00000224443 450 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 AC167669.3-201ENSMUST00000224720 393 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 AC147628.1-201ENSMUST00000228193 688 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Sdc1P18828 AC121598.3-201ENSMUST00000227179 1643 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Olfr1228-202ENSMUST00000215447 3223 ntAPPRIS ALT2 TSL 2 BASIC2.49□□□□□ -2.01
Sdc1P18828 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc1P18828 Gm44049-201ENSMUST00000204905 2984 ntBASIC2.49□□□□□ -2.01
Sdc1P18828 Ogn-201ENSMUST00000021822 2566 ntAPPRIS P1 TSL 1 (best) BASIC2.49□□□□□ -2.01
Sdc1P18828 Olfr810-203ENSMUST00000214878 4709 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Sdc1P18828 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sdc1P18828 Olfr652-203ENSMUST00000216131 4773 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Sdc1P18828 Gm31592-201ENSMUST00000217529 3471 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc1P18828 Mir551b-201ENSMUST00000102165 98 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm13761-201ENSMUST00000117238 807 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm13567-201ENSMUST00000118026 247 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm15061-201ENSMUST00000121076 1046 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm6265-201ENSMUST00000149263 231 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC2.48□□□□□ -2.01
Sdc1P18828 Gm3104-201ENSMUST00000171004 473 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm10292-201ENSMUST00000183142 581 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm27582-201ENSMUST00000184084 126 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm29192-201ENSMUST00000190942 377 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Ighv10-4-201ENSMUST00000193702 299 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm37587-202ENSMUST00000194935 475 ntTSL 3 BASIC2.48□□□□□ -2.01
Sdc1P18828 Gm38268-201ENSMUST00000195813 193 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc1P18828 4930528H21Rik-201ENSMUST00000204264 495 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc1P18828 2210414F02Rik-201ENSMUST00000215316 396 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc1P18828 AC154506.1-201ENSMUST00000225178 621 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 AC165415.1-201ENSMUST00000228924 273 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Olfr952-201ENSMUST00000073895 1056 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Sdc1P18828 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc1P18828 Snora23-201ENSMUST00000082517 184 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Gm25147-201ENSMUST00000083030 105 ntBASIC2.48□□□□□ -2.01
Sdc1P18828 Arhgef6-202ENSMUST00000114735 1614 ntTSL 1 (best) BASIC2.48□□□□□ -2.01
Sdc1P18828 Olfr811-204ENSMUST00000217571 2399 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sdc1P18828 Olfr896-ps1-202ENSMUST00000215219 2878 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sdc1P18828 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Sdc1P18828 Olfr1033-202ENSMUST00000213865 3664 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Sdc1P18828 Gm24340-201ENSMUST00000104208 97 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Pbsn-202ENSMUST00000114041 697 ntTSL 2 BASIC2.47□□□□□ -2.01
Sdc1P18828 Gm16082-201ENSMUST00000115992 377 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm9308-201ENSMUST00000119073 448 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm13627-201ENSMUST00000119700 706 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm22320-201ENSMUST00000157149 312 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm26101-201ENSMUST00000157246 105 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 Gm26099-201ENSMUST00000157248 109 ntBASIC2.47□□□□□ -2.01
Sdc1P18828 H2al2c-201ENSMUST00000163651 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Sdc1P18828 H2al2b-201ENSMUST00000168551 336 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 129 ms