Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC133934.2-201ENSMUST00000221729 4129 ntBASIC2.53□□□□□ -2
Col1a1P11087 Vmn2r68-201ENSMUST00000061074 2556 ntAPPRIS P1 TSL 5 BASIC2.53□□□□□ -2
Col1a1P11087 Gm20345-201ENSMUST00000175839 2414 ntBASIC2.53□□□□□ -2
Col1a1P11087 Aspn-202ENSMUST00000177948 2329 ntAPPRIS P1 TSL 1 (best) BASIC2.53□□□□□ -2
Col1a1P11087 Gm24900-201ENSMUST00000158128 134 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm16306-201ENSMUST00000160568 176 ntTSL 3 BASIC2.52□□□□□ -2.01
Col1a1P11087 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col1a1P11087 Gm23152-201ENSMUST00000175322 116 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Mir6901-201ENSMUST00000185062 62 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col1a1P11087 Gm44533-201ENSMUST00000207782 268 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Olfr499-ps1-201ENSMUST00000208811 930 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col1a1P11087 Olfr1186-203ENSMUST00000216978 1745 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Col1a1P11087 Mgat4c-211ENSMUST00000163753 3862 ntAPPRIS P1 TSL 3 BASIC2.52□□□□□ -2.01
Col1a1P11087 Vmn1r77-204ENSMUST00000228213 8094 ntAPPRIS ALT2 BASIC2.52□□□□□ -2.01
Col1a1P11087 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col1a1P11087 Igkv4-61-201ENSMUST00000103353 284 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col1a1P11087 Gm14469-201ENSMUST00000118363 202 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm14652-201ENSMUST00000118479 235 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Rpl30-ps11-201ENSMUST00000119630 345 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm12515-201ENSMUST00000120116 361 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm25966-201ENSMUST00000157169 117 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm7592-201ENSMUST00000160674 627 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm44490-201ENSMUST00000198566 127 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC2.52□□□□□ -2.01
Col1a1P11087 AC147615.1-201ENSMUST00000218914 441 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.52□□□□□ -2.01
Col1a1P11087 Gm10337-201ENSMUST00000096145 165 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Col1a1P11087 Olfr1025-ps1-202ENSMUST00000213474 3578 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm13431-201ENSMUST00000122948 476 ntTSL 2 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm26345-201ENSMUST00000157534 120 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 Ear-ps7-201ENSMUST00000161287 442 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 Gm8338-201ENSMUST00000163928 363 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 Defa27-201ENSMUST00000167683 282 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm22108-201ENSMUST00000177961 106 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 Gm8926-202ENSMUST00000178158 465 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm8879-202ENSMUST00000178863 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm8922-202ENSMUST00000178989 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm24798-201ENSMUST00000179334 106 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 Speer1-202ENSMUST00000179482 465 ntTSL 5 BASIC2.51□□□□□ -2.01
Col1a1P11087 Il6st-204ENSMUST00000183829 612 ntTSL 5 BASIC2.51□□□□□ -2.01
Col1a1P11087 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.51□□□□□ -2.01
Col1a1P11087 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 AC115735.3-201ENSMUST00000227757 513 ntBASIC2.51□□□□□ -2.01
Col1a1P11087 Gngt1-201ENSMUST00000031673 1183 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
Col1a1P11087 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col1a1P11087 Olfr1474-201ENSMUST00000096202 945 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Col1a1P11087 Gm10400-201ENSMUST00000203920 3835 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Col1a1P11087 Gm21032-201ENSMUST00000208108 2578 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Gm22713-201ENSMUST00000116895 130 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Il23r-201ENSMUST00000118364 2488 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col1a1P11087 Gm15241-201ENSMUST00000125700 474 ntTSL 3 BASIC2.5□□□□□ -2.01
Col1a1P11087 Gm24769-201ENSMUST00000158506 129 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Gm6486-201ENSMUST00000166202 434 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Gm19791-201ENSMUST00000180398 859 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Gm44133-201ENSMUST00000203823 701 ntTSL 2 BASIC2.5□□□□□ -2.01
Col1a1P11087 Gm46146-201ENSMUST00000217483 346 ntBASIC2.5□□□□□ -2.01
Col1a1P11087 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
Col1a1P11087 Olfr726-204ENSMUST00000215105 1752 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col1a1P11087 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm9850-201ENSMUST00000117916 227 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm14541-201ENSMUST00000118985 157 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC2.49□□□□□ -2.01
Col1a1P11087 Gm23599-201ENSMUST00000157261 251 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm23179-201ENSMUST00000158693 304 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm27636-201ENSMUST00000184528 122 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm29534-201ENSMUST00000187328 382 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Gm45272-202ENSMUST00000209875 502 ntTSL 3 BASIC2.49□□□□□ -2.01
Col1a1P11087 AC133598.4-202ENSMUST00000225267 469 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Defa-ps18-201ENSMUST00000098889 371 ntBASIC2.49□□□□□ -2.01
Col1a1P11087 Olfr166-202ENSMUST00000213531 4205 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Col1a1P11087 BC051076-202ENSMUST00000199477 2868 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Col1a1P11087 Gm22149-201ENSMUST00000104442 136 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm16383-201ENSMUST00000118122 232 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm13923-201ENSMUST00000153283 288 ntTSL 3 BASIC2.48□□□□□ -2.01
Col1a1P11087 Gm22556-201ENSMUST00000157803 100 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm25606-201ENSMUST00000158363 95 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm26024-201ENSMUST00000158657 322 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm27952-201ENSMUST00000184748 105 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Igkv2-105-201ENSMUST00000196931 377 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm18540-201ENSMUST00000204025 526 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Gm8679-201ENSMUST00000210651 1036 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 AC101984.1-201ENSMUST00000219639 402 ntBASIC2.48□□□□□ -2.01
Col1a1P11087 Olfr775-201ENSMUST00000097163 939 ntAPPRIS P1 BASIC2.48□□□□□ -2.01
Col1a1P11087 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Mir147-201ENSMUST00000102354 79 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Trbv15-201ENSMUST00000103273 370 ntAPPRIS P1 BASIC2.47□□□□□ -2.01
Col1a1P11087 Gm12492-201ENSMUST00000117665 564 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Gm9225-201ENSMUST00000121921 836 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Sval2-201ENSMUST00000014248 585 ntAPPRIS P1 TSL 1 (best) BASIC2.47□□□□□ -2.01
Col1a1P11087 Gm24394-201ENSMUST00000158141 123 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Gm24638-201ENSMUST00000179807 132 ntBASIC2.47□□□□□ -2.01
Col1a1P11087 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC2.47□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms