Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Rpl38-201ENSMUST00000077915 364 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd3P09027 Gm24525-201ENSMUST00000082917 151 ntBASIC4.28□□□□□ -1.72
Hoxd3P09027 Prom1-207ENSMUST00000177946 3534 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd3P09027 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC4.28□□□□□ -1.72
Hoxd3P09027 Uhmk1-203ENSMUST00000150821 7676 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
Hoxd3P09027 Gm43025-201ENSMUST00000201764 1886 ntBASIC4.28□□□□□ -1.72
Hoxd3P09027 Ythdc1-201ENSMUST00000038384 2960 ntAPPRIS P3 TSL 5 BASIC4.28□□□□□ -1.72
Hoxd3P09027 5730507A11Rik-201ENSMUST00000204297 3371 ntBASIC4.28□□□□□ -1.72
Hoxd3P09027 Gm6729-202ENSMUST00000219485 2209 ntTSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm43784-201ENSMUST00000202922 2436 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Olfr676-204ENSMUST00000219602 2802 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Hspa13-201ENSMUST00000046283 4069 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 1500005C15Rik-201ENSMUST00000199867 2394 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm17275-201ENSMUST00000181811 2550 ntTSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm43197-201ENSMUST00000201493 2583 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm45311-201ENSMUST00000211086 1330 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Olfr459-202ENSMUST00000214752 3715 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Cbx5-201ENSMUST00000108813 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm37880-201ENSMUST00000192216 3257 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC4.27□□□□□ -1.73
Hoxd3P09027 AC152981.1-201ENSMUST00000218320 2480 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Cdc27-201ENSMUST00000093923 5425 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Igkv4-92-201ENSMUST00000103332 351 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm24124-201ENSMUST00000104103 132 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm23750-201ENSMUST00000104222 132 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Catsper4-202ENSMUST00000105878 632 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm13887-201ENSMUST00000119009 344 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm15493-201ENSMUST00000119461 528 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm11204-201ENSMUST00000122438 147 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm25291-201ENSMUST00000122795 144 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm25863-201ENSMUST00000158249 329 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm22606-201ENSMUST00000158290 103 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm17100-201ENSMUST00000168963 272 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm22411-201ENSMUST00000175462 126 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm22002-201ENSMUST00000175622 125 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm27754-201ENSMUST00000183340 126 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm37640-201ENSMUST00000195407 300 ntTSL 3 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm43704-201ENSMUST00000196164 496 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm9332-201ENSMUST00000198431 730 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Igkv4-56-201ENSMUST00000198436 349 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Pvrig-ps-201ENSMUST00000199472 204 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 AC153800.1-201ENSMUST00000219212 365 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Rps11-ps4-201ENSMUST00000062226 474 ntBASIC4.27□□□□□ -1.73
Hoxd3P09027 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Glcci1-206ENSMUST00000162567 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Olfr328-204ENSMUST00000216725 2904 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
Hoxd3P09027 Bbox1-201ENSMUST00000046233 4030 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
Hoxd3P09027 Gnrhr-203ENSMUST00000113372 2265 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm3896-201ENSMUST00000176020 4094 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm37101-201ENSMUST00000191656 3660 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Ryr3-202ENSMUST00000091818 15410 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Vmn2r-ps57-201ENSMUST00000173861 2598 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Sirpb1a-203ENSMUST00000192700 1499 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm19428-201ENSMUST00000220512 1995 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Zfp607a-203ENSMUST00000205715 4031 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Igsf10-202ENSMUST00000193455 8484 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Vmn1r84-201ENSMUST00000086228 2452 ntAPPRIS P2 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm15752-201ENSMUST00000117427 394 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm15313-201ENSMUST00000119179 282 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm14472-201ENSMUST00000119815 282 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Defa-ps8-201ENSMUST00000120972 279 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm11677-201ENSMUST00000121349 977 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm22106-201ENSMUST00000122544 127 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm7582-201ENSMUST00000160831 603 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm25935-201ENSMUST00000178746 107 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm10251-201ENSMUST00000178788 384 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Mir7087-201ENSMUST00000184840 70 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 2810429I04Rik-209ENSMUST00000188642 674 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm37796-201ENSMUST00000195327 134 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Igkv12-66-201ENSMUST00000199305 348 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm43554-201ENSMUST00000199987 186 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm32591-202ENSMUST00000204063 403 ntTSL 3 BASIC4.26□□□□□ -1.73
Hoxd3P09027 1700072O05Rik-201ENSMUST00000204672 321 ntTSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm18991-201ENSMUST00000209225 746 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm45498-201ENSMUST00000210346 283 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 AC145731.1-201ENSMUST00000214083 344 ntTSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 AC121264.1-201ENSMUST00000214412 269 ntTSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm22806-201ENSMUST00000082738 136 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm22353-201ENSMUST00000083918 136 ntBASIC4.26□□□□□ -1.73
Hoxd3P09027 Fam71d-201ENSMUST00000077968 1772 ntAPPRIS P2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Mfn1-202ENSMUST00000118286 2789 ntAPPRIS P1 TSL 2 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Olfr224-202ENSMUST00000215322 1940 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
Hoxd3P09027 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Iqch-204ENSMUST00000163982 3375 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Gm33609-201ENSMUST00000198559 2694 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Zfp583-202ENSMUST00000108560 2154 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Ints12-201ENSMUST00000029650 3101 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Hoxd3P09027 Trps1-203ENSMUST00000183421 3446 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
Hoxd3P09027 Vmn1r197-203ENSMUST00000227017 5158 ntAPPRIS P1 BASIC4.25□□□□□ -1.73
Retrieved 100 of 76,532 protein–RNA pairs in 119.2 ms