Protein–RNA interactions for Protein: O88207

Col5a1, Collagen alpha-1(V) chain, mousemouse

Predictions only

Length 1,838 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col5a1O88207 Gm27991-201ENSMUST00000184804 137 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm37768-201ENSMUST00000192748 887 ntTSL 3 BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm31925-201ENSMUST00000193561 600 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm42828-201ENSMUST00000199669 469 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm44877-201ENSMUST00000206485 274 ntTSL 5 BASIC2.31□□□□□ -2.04
Col5a1O88207 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm16381-201ENSMUST00000220528 503 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm2001-201ENSMUST00000223236 503 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Col5a1O88207 AC126690.1-201ENSMUST00000228898 397 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Col5a1O88207 Gm23677-201ENSMUST00000083156 104 ntBASIC2.31□□□□□ -2.04
Col5a1O88207 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col5a1O88207 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col5a1O88207 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col5a1O88207 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col5a1O88207 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col5a1O88207 Olfr509-203ENSMUST00000214861 3535 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col5a1O88207 Gm23010-201ENSMUST00000104151 126 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm14525-201ENSMUST00000119649 893 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col5a1O88207 Gm17072-201ENSMUST00000166673 658 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Fth-ps2-201ENSMUST00000168364 516 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm8871-202ENSMUST00000168945 549 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
Col5a1O88207 Vmn1r-ps53-201ENSMUST00000173066 922 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Vmn1r25-201ENSMUST00000176572 1101 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Col5a1O88207 Vmn2r-ps16-201ENSMUST00000178737 377 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm28637-201ENSMUST00000179424 345 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Vmn2r-ps15-201ENSMUST00000180112 377 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm27952-201ENSMUST00000184748 105 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm27427-201ENSMUST00000185134 193 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Sumo1-203ENSMUST00000185265 532 ntTSL 3 BASIC2.3□□□□□ -2.04
Col5a1O88207 Gm28788-201ENSMUST00000189717 375 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm28189-201ENSMUST00000190085 571 ntTSL 3 BASIC2.3□□□□□ -2.04
Col5a1O88207 Gm29558-201ENSMUST00000190134 375 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Mir497-201ENSMUST00000200557 84 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 AC158598.1-201ENSMUST00000214349 3847 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Spata31-201ENSMUST00000070216 3232 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col5a1O88207 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Col5a1O88207 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Gm37903-201ENSMUST00000192122 2381 ntBASIC2.3□□□□□ -2.04
Col5a1O88207 Zfp985-201ENSMUST00000081742 2762 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Col5a1O88207 Gm43780-201ENSMUST00000196510 3600 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 AC154552.6-201ENSMUST00000221365 1342 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm23472-201ENSMUST00000101806 191 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm13228-201ENSMUST00000118937 634 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm12042-201ENSMUST00000120479 301 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm12443-201ENSMUST00000122308 323 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC2.29□□□□□ -2.04
Col5a1O88207 1700071G01Rik-201ENSMUST00000146728 367 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm16129-201ENSMUST00000152628 486 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm23819-201ENSMUST00000158744 109 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Spink10-206ENSMUST00000162511 684 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm24497-201ENSMUST00000177868 191 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm25939-201ENSMUST00000179876 191 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm3496-201ENSMUST00000188283 745 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm19224-201ENSMUST00000190477 793 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm33571-201ENSMUST00000193271 657 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm44060-201ENSMUST00000204440 410 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm44665-201ENSMUST00000205381 251 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm18015-201ENSMUST00000214879 316 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Gm23444-201ENSMUST00000082922 191 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Olfr1282-201ENSMUST00000099618 918 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Col5a1O88207 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.29□□□□□ -2.04
Col5a1O88207 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Col5a1O88207 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
Col5a1O88207 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC2.29□□□□□ -2.04
Col5a1O88207 Gm25647-201ENSMUST00000101832 78 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm25823-201ENSMUST00000101995 78 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm9440-201ENSMUST00000119667 539 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Cyp4a29-ps1-201ENSMUST00000120882 171 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm15244-201ENSMUST00000121122 130 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm14804-201ENSMUST00000122322 508 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Vmn1r-ps3-201ENSMUST00000122439 917 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm25102-201ENSMUST00000122479 112 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC2.28□□□□□ -2.04
Col5a1O88207 AI847159-204ENSMUST00000148997 753 ntTSL 3 BASIC2.28□□□□□ -2.04
Col5a1O88207 Gm25839-201ENSMUST00000158921 103 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm16147-201ENSMUST00000162143 373 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
Col5a1O88207 Gm8224-201ENSMUST00000166178 497 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Adgrg4-206ENSMUST00000168724 531 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm24220-201ENSMUST00000177753 79 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm25988-201ENSMUST00000177759 79 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm23471-201ENSMUST00000177886 79 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm26488-201ENSMUST00000178225 79 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm23449-201ENSMUST00000179208 79 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm25221-201ENSMUST00000180051 79 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 2310010J17Rik-201ENSMUST00000181189 490 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Col5a1O88207 Gm37098-201ENSMUST00000192290 244 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm19057-201ENSMUST00000194329 1197 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Obox4-ps4-201ENSMUST00000196934 397 ntBASIC2.28□□□□□ -2.04
Col5a1O88207 Gm5309-201ENSMUST00000197416 677 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.3 ms