Protein–RNA interactions for Protein: O55142

Rpl35a, 60S ribosomal protein L35a, mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl35aO55142 Wfdc18-201ENSMUST00000001009 521 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 Igkv9-124-201ENSMUST00000103312 287 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Igkv12-98-201ENSMUST00000103327 344 ntAPPRIS ALT2 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm14628-201ENSMUST00000117508 635 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Rps12-ps26-201ENSMUST00000117751 333 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 AA413626-201ENSMUST00000121125 494 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 n-R5s80-201ENSMUST00000122596 111 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm25283-201ENSMUST00000157272 77 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm25341-201ENSMUST00000157461 268 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm26171-201ENSMUST00000158422 131 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm24737-201ENSMUST00000158861 100 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Nron-204ENSMUST00000158971 370 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Nbeal1-203ENSMUST00000160834 15731 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm16290-201ENSMUST00000161175 474 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm15796-201ENSMUST00000162135 204 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm17148-201ENSMUST00000164702 249 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Vmn2r-ps79-201ENSMUST00000174256 377 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm27896-201ENSMUST00000175162 317 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm8532-201ENSMUST00000179174 461 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 A930005H10Rik-205ENSMUST00000187055 436 ntTSL 3 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm28685-201ENSMUST00000187545 1101 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Olfr1556-ps1-201ENSMUST00000204688 466 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm17811-201ENSMUST00000206193 387 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm44870-201ENSMUST00000207291 357 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm45911-201ENSMUST00000211844 601 ntTSL 3 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rpl35aO55142 CAAA01090811.1-201ENSMUST00000216828 277 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm46327-201ENSMUST00000218240 365 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 AC116460.1-201ENSMUST00000219040 313 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm2436-201ENSMUST00000219562 774 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 AC132954.1-201ENSMUST00000221017 342 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm22974-201ENSMUST00000083301 103 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 Gm23650-201ENSMUST00000083355 70 ntBASIC3.3□□□□□ -1.88
Rpl35aO55142 AW112010-201ENSMUST00000099676 770 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 Olfr733-204ENSMUST00000216195 3669 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Ccr1-201ENSMUST00000026911 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 Btla-201ENSMUST00000063654 3235 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 Olfr1251-202ENSMUST00000214639 3071 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 Olfr711-202ENSMUST00000207200 2966 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
Rpl35aO55142 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
Rpl35aO55142 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Xlr3c-201ENSMUST00000080839 1584 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Olfr107-205ENSMUST00000216844 4021 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Cyp3a41b-201ENSMUST00000075837 2064 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Vmn1r178-203ENSMUST00000226489 2644 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Esp34-201ENSMUST00000173055 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm3683-201ENSMUST00000175701 2513 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Mmp8-201ENSMUST00000018765 2425 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm37397-201ENSMUST00000194579 2842 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm5757-201ENSMUST00000117494 528 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm4852-201ENSMUST00000121202 729 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm12819-201ENSMUST00000122223 629 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm13868-201ENSMUST00000122411 294 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm11506-201ENSMUST00000122414 470 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm25827-201ENSMUST00000157089 107 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm26041-201ENSMUST00000158148 108 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm26402-201ENSMUST00000158499 113 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Ear-ps12-201ENSMUST00000161720 451 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm1979-202ENSMUST00000170224 666 ntTSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Vmn1r-ps68-201ENSMUST00000174638 399 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Hmgb1-ps8-201ENSMUST00000181542 626 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Mir6963-201ENSMUST00000183535 71 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm27165-201ENSMUST00000183951 232 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm27940-201ENSMUST00000184449 98 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm10105-201ENSMUST00000184601 270 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 C230029F24Rik-202ENSMUST00000188673 554 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm38150-201ENSMUST00000192996 452 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm37881-201ENSMUST00000193001 421 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm37636-201ENSMUST00000193583 359 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm37670-201ENSMUST00000193622 229 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm42830-201ENSMUST00000196642 313 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Olfr638-202ENSMUST00000218325 1158 ntAPPRIS ALT2 TSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 AC124346.1-201ENSMUST00000218539 364 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 AC139376.1-201ENSMUST00000220056 1250 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 AC134420.1-201ENSMUST00000227027 289 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Olfr437-201ENSMUST00000060243 1018 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm23378-201ENSMUST00000082942 107 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Zfp616-201ENSMUST00000074813 5014 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm15304-201ENSMUST00000122150 2640 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm5362-201ENSMUST00000211968 3085 ntBASIC3.29□□□□□ -1.88
Rpl35aO55142 Vmn2r90-201ENSMUST00000169805 2592 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
Rpl35aO55142 Gm44283-201ENSMUST00000204461 3950 ntBASIC3.28□□□□□ -1.88
Rpl35aO55142 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Rpl35aO55142 Klhl13-204ENSMUST00000115317 3216 ntAPPRIS ALT1 TSL 5 BASIC3.28□□□□□ -1.88
Rpl35aO55142 Ccdc73-201ENSMUST00000111114 3944 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Rpl35aO55142 Olfr620-201ENSMUST00000052152 3157 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
Rpl35aO55142 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Rpl35aO55142 Olfr784-202ENSMUST00000214064 3119 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
Rpl35aO55142 Mir92b-201ENSMUST00000102300 83 ntBASIC3.28□□□□□ -1.88
Rpl35aO55142 Mir759-201ENSMUST00000103254 98 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms