Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm22911-201ENSMUST00000177920 107 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm4761-201ENSMUST00000178086 582 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm4617-201ENSMUST00000178993 331 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Mir6343-201ENSMUST00000183584 84 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Mir7006-201ENSMUST00000183624 69 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm27492-201ENSMUST00000185194 187 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Ly96-202ENSMUST00000190366 429 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm37568-201ENSMUST00000191755 364 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm37881-201ENSMUST00000193001 421 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm37636-201ENSMUST00000193583 359 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm44456-201ENSMUST00000196554 89 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm43712-201ENSMUST00000198020 291 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Igkv13-64-201ENSMUST00000198143 343 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Mir691-201ENSMUST00000199719 78 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm45083-201ENSMUST00000205216 712 ntTSL 3 BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 AC107808.1-201ENSMUST00000213260 386 ntTSL 3 BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 AC159231.1-201ENSMUST00000225365 226 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 AC168881.1-201ENSMUST00000226018 430 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 AC137961.1-201ENSMUST00000227924 734 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm5689-201ENSMUST00000041389 294 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm25801-201ENSMUST00000082638 106 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm25140-201ENSMUST00000083254 140 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Mir188-201ENSMUST00000083464 68 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm25207-201ENSMUST00000093745 107 ntBASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Plcb4-201ENSMUST00000035646 3635 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Dnah7c-204ENSMUST00000189749 12207 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
Pcdh1F7BJK1 Gda-202ENSMUST00000121725 2450 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Olfr91-202ENSMUST00000216376 3832 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Fscb-201ENSMUST00000059833 3361 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Nxf2-203ENSMUST00000113189 2375 ntAPPRIS P3 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm37642-201ENSMUST00000193166 1735 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Vmn1r42-202ENSMUST00000226436 4045 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Igkv8-19-201ENSMUST00000103389 305 ntAPPRIS P1 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm13880-201ENSMUST00000118421 474 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm8217-201ENSMUST00000119136 465 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Spink2-202ENSMUST00000120429 594 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm14269-201ENSMUST00000120455 306 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm2182-201ENSMUST00000145243 663 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm22842-201ENSMUST00000157709 118 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm25906-201ENSMUST00000158489 126 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Scarna6-201ENSMUST00000158656 265 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm25643-201ENSMUST00000158874 103 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm28097-201ENSMUST00000187333 366 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm5368-201ENSMUST00000189012 589 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Zfp813-ps-202ENSMUST00000204773 618 ntTSL 5 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm18007-201ENSMUST00000205019 844 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm44811-201ENSMUST00000209120 228 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Olfr673-ps1-201ENSMUST00000210859 411 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 CR974429.1-201ENSMUST00000220877 827 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm33654-201ENSMUST00000221704 215 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 AC126673.3-201ENSMUST00000223414 3829 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 AC157772.2-201ENSMUST00000228202 259 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Defb7-201ENSMUST00000047851 306 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Kap-201ENSMUST00000048032 707 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm23514-201ENSMUST00000082827 130 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm26164-201ENSMUST00000083793 104 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Vmn2r35-201ENSMUST00000169683 2586 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm35191-201ENSMUST00000200925 2475 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Hm629797-201ENSMUST00000183645 2398 ntBASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Atrx-202ENSMUST00000113573 10275 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Dmd-201ENSMUST00000113991 4438 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Themis-202ENSMUST00000060409 2278 ntAPPRIS ALT2 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
Pcdh1F7BJK1 Gm38265-201ENSMUST00000193479 3766 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm37397-201ENSMUST00000194579 2842 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Olfr588-ps1-201ENSMUST00000118682 4607 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 AC131743.1-201ENSMUST00000222138 4024 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 n-R5s202-201ENSMUST00000104517 114 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm13046-201ENSMUST00000117391 501 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm15994-201ENSMUST00000118029 402 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm12311-201ENSMUST00000118803 374 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Rps18-ps2-201ENSMUST00000119493 398 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm15807-201ENSMUST00000119880 1128 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm5391-201ENSMUST00000121155 613 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 n-R5s80-201ENSMUST00000122596 111 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm4916-201ENSMUST00000126139 642 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm23171-201ENSMUST00000157159 264 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm25624-201ENSMUST00000157222 275 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm16114-201ENSMUST00000161930 300 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm9022-202ENSMUST00000183285 483 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm29454-201ENSMUST00000190805 393 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm37746-201ENSMUST00000193249 198 ntBASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm40040-202ENSMUST00000196337 305 ntTSL 3 BASIC4.18□□□□□ -1.74
Pcdh1F7BJK1 Gm45032-201ENSMUST00000205375 520 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 91.2 ms