Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1464-ps1-201ENSMUST00000208760 923 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm17872-201ENSMUST00000222550 532 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm10088-201ENSMUST00000074116 423 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Snora23-201ENSMUST00000082517 184 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm22979-201ENSMUST00000082609 159 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm24254-201ENSMUST00000083702 104 ntBASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr561-201ENSMUST00000098217 1071 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr186-203ENSMUST00000216415 2323 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr811-202ENSMUST00000215058 2508 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1289-201ENSMUST00000120021 1643 ntAPPRIS ALT2 TSL 5 BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Uty-208ENSMUST00000154004 4267 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
Trbv1A0A0B4J1G7 Nexn-211ENSMUST00000199423 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44925-201ENSMUST00000208879 2110 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm45104-201ENSMUST00000208748 4350 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr594-202ENSMUST00000214051 2809 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm3234-202ENSMUST00000223301 3250 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 AC104897.1-201ENSMUST00000222638 3628 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm5483-201ENSMUST00000114858 414 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14448-201ENSMUST00000116383 210 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm22072-201ENSMUST00000116850 121 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Rpl30-ps3-201ENSMUST00000117928 348 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Rps27-ps1-201ENSMUST00000118179 246 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14913-201ENSMUST00000120011 1093 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm12042-201ENSMUST00000120479 301 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm11252-201ENSMUST00000120572 939 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm15190-201ENSMUST00000120855 276 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm13210-201ENSMUST00000121483 273 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm15065-201ENSMUST00000121699 273 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm8840-201ENSMUST00000122454 386 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm12976-202ENSMUST00000153817 412 ntTSL 3 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23409-201ENSMUST00000158516 237 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Nron-204ENSMUST00000158971 370 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm17164-201ENSMUST00000169013 506 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Klrc1-204ENSMUST00000169545 676 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23053-201ENSMUST00000175136 96 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm21893-201ENSMUST00000179119 397 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27964-201ENSMUST00000185195 62 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm8739-201ENSMUST00000185962 181 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Trbv12-3-201ENSMUST00000192675 372 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Fabp9-203ENSMUST00000193487 486 ntTSL 3 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm37085-201ENSMUST00000193780 196 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm38018-201ENSMUST00000195651 540 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43043-201ENSMUST00000196579 412 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Igkv13-62-1-201ENSMUST00000198690 317 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43746-201ENSMUST00000200028 317 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Igkv8-31-201ENSMUST00000200040 372 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Eif4e-205ENSMUST00000200100 729 ntTSL 3 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44157-201ENSMUST00000204720 410 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm45146-201ENSMUST00000207108 221 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm7624-201ENSMUST00000209702 435 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm45829-201ENSMUST00000212466 334 ntTSL 5 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm18892-201ENSMUST00000217628 881 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 AC122484.1-201ENSMUST00000221578 177 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 CT030184.1-201ENSMUST00000222393 416 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm18026-201ENSMUST00000222789 727 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 AC154515.2-201ENSMUST00000226093 406 ntBASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr164-201ENSMUST00000056727 1095 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm5127-201ENSMUST00000101296 1455 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 N4bp2l2-201ENSMUST00000118316 8982 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr597-202ENSMUST00000216456 2727 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm43498-201ENSMUST00000202002 1486 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm7974-201ENSMUST00000117154 408 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm15282-201ENSMUST00000117707 300 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14469-201ENSMUST00000118363 202 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm15025-201ENSMUST00000118434 418 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm14731-201ENSMUST00000119216 376 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Rpl36a-ps3-201ENSMUST00000120093 321 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm11414-201ENSMUST00000121795 263 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm23470-201ENSMUST00000157129 120 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm24730-201ENSMUST00000158228 117 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm22769-201ENSMUST00000158367 98 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm17063-201ENSMUST00000168135 456 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Ear-ps3-201ENSMUST00000168308 445 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r139-201ENSMUST00000169730 894 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r112-201ENSMUST00000174538 894 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Vmn1r157-201ENSMUST00000178215 894 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Esp15-201ENSMUST00000178929 1168 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27921-201ENSMUST00000183968 108 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm27893-201ENSMUST00000184408 194 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Olfr1055-202ENSMUST00000188023 939 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm8023-201ENSMUST00000195298 903 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm42828-201ENSMUST00000199669 469 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm8209-201ENSMUST00000206386 553 ntBASIC2.29□□□□□ -2.04
Trbv1A0A0B4J1G7 Gm44718-201ENSMUST00000206886 359 ntBASIC2.29□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms