Protein–RNA interactions for Protein: A0A075B638

Trav4-2, T cell receptor alpha variable 4-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-2A0A075B638 Gm22766-201ENSMUST00000158372 99 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm15564-202ENSMUST00000173605 402 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Mir7016-201ENSMUST00000184308 72 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm38127-201ENSMUST00000191978 468 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm30667-201ENSMUST00000193120 870 ntTSL 1 (best) BASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm37740-202ENSMUST00000194757 621 ntTSL 5 BASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm7675-201ENSMUST00000208828 686 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm45474-201ENSMUST00000209471 408 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm45742-201ENSMUST00000212400 433 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm19137-201ENSMUST00000213790 1164 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 AC126673.2-201ENSMUST00000221052 686 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 AC133598.3-201ENSMUST00000224322 568 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 4930447F04Rik-201ENSMUST00000033525 703 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Tmed11-201ENSMUST00000004943 763 ntAPPRIS P1 TSL 1 (best) BASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Gm6215-201ENSMUST00000119297 1386 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 AC152951.2-201ENSMUST00000218293 3587 ntBASIC1.67□□□□□ -2.14
Trav4-2A0A075B638 Csnka2ip-201ENSMUST00000089279 1336 ntAPPRIS P2 BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Crisp2-201ENSMUST00000024724 1438 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Crisp3-201ENSMUST00000026499 1417 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 AC153526.2-201ENSMUST00000218206 2031 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Zfp85-202ENSMUST00000144183 2312 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm15025-201ENSMUST00000118434 418 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm11418-201ENSMUST00000156193 626 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm24783-201ENSMUST00000157639 100 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm24314-201ENSMUST00000158274 123 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm26215-201ENSMUST00000158584 139 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm23342-201ENSMUST00000158958 115 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Vmn1r-ps61-201ENSMUST00000173771 822 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Rpl31-ps21-201ENSMUST00000181182 374 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm27233-201ENSMUST00000184030 307 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm21489-201ENSMUST00000189668 818 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm28788-201ENSMUST00000189717 375 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm29558-201ENSMUST00000190134 375 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Ttn-225ENSMUST00000190813 300 ntTSL 5 BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm28314-201ENSMUST00000191276 345 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm44348-201ENSMUST00000200165 122 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm44600-201ENSMUST00000208540 111 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Rpl26-ps6-201ENSMUST00000216693 434 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm18892-201ENSMUST00000217628 881 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 AC147545.1-201ENSMUST00000227528 108 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Defb4-201ENSMUST00000081017 454 ntAPPRIS P1 TSL 1 (best) BASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 AF357428-201ENSMUST00000083815 69 ntBASIC1.66□□□□□ -2.14
Trav4-2A0A075B638 Gm12401-201ENSMUST00000118435 228 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm11356-201ENSMUST00000118974 192 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm22208-201ENSMUST00000122658 110 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Prl2c5-202ENSMUST00000126540 971 ntAPPRIS ALT2 TSL 1 (best) BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm24138-201ENSMUST00000157572 114 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm22849-201ENSMUST00000157713 307 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm22534-201ENSMUST00000158173 104 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm24553-201ENSMUST00000158653 131 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm17075-201ENSMUST00000171924 670 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm21865-201ENSMUST00000177713 498 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm7909-201ENSMUST00000182688 614 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm27505-201ENSMUST00000185071 110 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Olfr576-202ENSMUST00000185326 927 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm21139-201ENSMUST00000186594 877 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm17967-201ENSMUST00000195319 647 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Gm32283-201ENSMUST00000218861 549 ntTSL 5 BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 AC129085.5-201ENSMUST00000225468 400 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 AC090496.1-201ENSMUST00000226020 260 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 AC164100.1-201ENSMUST00000227214 508 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 AC123860.1-201ENSMUST00000228033 481 ntBASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Olfr727-201ENSMUST00000079142 1035 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
Trav4-2A0A075B638 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm42801-201ENSMUST00000202562 2865 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm25526-201ENSMUST00000104332 132 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm22494-201ENSMUST00000104495 128 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm23803-201ENSMUST00000104610 132 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Prl-202ENSMUST00000110369 895 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm12509-201ENSMUST00000118033 609 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm15094-201ENSMUST00000118394 1131 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Rps13-ps8-201ENSMUST00000118906 401 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Olfr1050-ps1-201ENSMUST00000119802 947 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm15103-201ENSMUST00000119893 871 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm14588-201ENSMUST00000119895 172 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm12587-201ENSMUST00000120180 427 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm13901-201ENSMUST00000137252 468 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm23469-201ENSMUST00000157131 104 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm22226-201ENSMUST00000157355 109 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm23053-201ENSMUST00000175136 96 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Cldn34c2-201ENSMUST00000178457 702 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Mir6379-201ENSMUST00000183392 115 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm27698-201ENSMUST00000184060 249 ntBASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 4930558F17Rik-201ENSMUST00000197789 786 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Fbxw15-203ENSMUST00000198397 927 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm43640-201ENSMUST00000199000 786 ntTSL 5 BASIC1.64□□□□□ -2.15
Trav4-2A0A075B638 Gm33847-201ENSMUST00000199294 786 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 97.5 ms