Protein–RNA interactions for Protein: Q9D6Y1

Ccdc3, Coiled-coil domain-containing protein 3, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc3Q9D6Y1 AC122901.2-201ENSMUST00000216926 285 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 AC087891.1-201ENSMUST00000217867 318 ntTSL 5 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 AC126043.1-201ENSMUST00000221304 1141 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 AC166113.1-201ENSMUST00000225258 475 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 AC155167.3-201ENSMUST00000226349 217 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr1462-201ENSMUST00000076832 924 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr1369-ps1-205ENSMUST00000215941 3597 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm11284-201ENSMUST00000121910 1887 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Zfp97-201ENSMUST00000147630 2684 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm44842-201ENSMUST00000209173 3372 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43201-201ENSMUST00000195925 3416 ntBASIC2.7□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn1r21-203ENSMUST00000226191 1669 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 A530030E21Rik-201ENSMUST00000199551 1310 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Tex16-201ENSMUST00000038546 3972 ntAPPRIS P2 TSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm5929-201ENSMUST00000166883 487 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm24816-201ENSMUST00000175311 151 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn1r-ps48-201ENSMUST00000176352 886 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr1187-ps1-201ENSMUST00000177576 334 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 1700063H06Rik-201ENSMUST00000183678 445 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm8392-201ENSMUST00000185647 835 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm37353-201ENSMUST00000194497 313 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Igkv15-97-201ENSMUST00000197637 339 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm36017-201ENSMUST00000199005 923 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm7443-201ENSMUST00000206355 378 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr496-ps1-201ENSMUST00000208862 915 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm7422-201ENSMUST00000220115 640 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 AC120555.1-201ENSMUST00000221020 222 ntTSL 5 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Tgif2lx2-201ENSMUST00000072518 1030 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Tgif2lx1-201ENSMUST00000073857 1030 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Mir325-201ENSMUST00000083491 98 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Gm23850-201ENSMUST00000083830 169 ntBASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr896-ps1-203ENSMUST00000216276 2921 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC2.69□□□□□ -1.98
Ccdc3Q9D6Y1 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm22750-201ENSMUST00000102076 103 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm24951-201ENSMUST00000102182 109 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Mir804-201ENSMUST00000103251 95 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Mir294-201ENSMUST00000104710 84 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm14403-201ENSMUST00000108940 774 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm14897-201ENSMUST00000118213 207 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm14607-201ENSMUST00000119119 491 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm11456-201ENSMUST00000121070 256 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm16363-201ENSMUST00000132460 877 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm16218-201ENSMUST00000155424 388 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm24358-201ENSMUST00000158424 288 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm7582-201ENSMUST00000160831 603 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29492-201ENSMUST00000187124 457 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43104-201ENSMUST00000197234 311 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm42593-201ENSMUST00000198469 377 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm42516-201ENSMUST00000198691 767 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 4930431L21Rik-202ENSMUST00000200253 624 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm44718-201ENSMUST00000206886 359 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm45600-201ENSMUST00000210828 234 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm2436-201ENSMUST00000219562 774 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr791-201ENSMUST00000057477 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Scgb1b2-201ENSMUST00000080635 424 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr57-201ENSMUST00000082244 1080 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Gm25699-201ENSMUST00000082896 167 ntBASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC2.68□□□□□ -1.98
Ccdc3Q9D6Y1 Olfr748-202ENSMUST00000213101 3632 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm5141-202ENSMUST00000201047 3279 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Ighv1-54-201ENSMUST00000103525 377 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm9432-201ENSMUST00000117810 759 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm6591-201ENSMUST00000121063 434 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Clec5a-203ENSMUST00000129948 858 ntAPPRIS P4 TSL 1 (best) BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm24922-201ENSMUST00000158511 102 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm23312-201ENSMUST00000158774 102 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm20718-201ENSMUST00000176058 259 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm18415-201ENSMUST00000177464 647 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm20660-201ENSMUST00000177515 289 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Mir7068-201ENSMUST00000183439 74 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29524-201ENSMUST00000190819 699 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm38076-201ENSMUST00000193889 450 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm37616-201ENSMUST00000193974 322 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43489-201ENSMUST00000196810 993 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm43614-201ENSMUST00000197030 517 ntTSL 2 BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm45588-201ENSMUST00000211213 630 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 Gm29521-204ENSMUST00000216859 279 ntTSL 5 BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 AC154257.2-201ENSMUST00000224166 340 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 AC159188.1-201ENSMUST00000225198 526 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 AC144819.1-201ENSMUST00000227015 620 ntBASIC2.67□□□□□ -1.98
Ccdc3Q9D6Y1 AC147545.1-201ENSMUST00000227528 108 ntBASIC2.67□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 92.2 ms