Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm15988-201ENSMUST00000118677 367 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm12507-201ENSMUST00000119155 415 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm5937-201ENSMUST00000119715 643 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm15037-201ENSMUST00000120358 259 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm16445-201ENSMUST00000120399 714 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm14599-201ENSMUST00000120469 474 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm13973-201ENSMUST00000121371 894 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm26254-201ENSMUST00000122491 118 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm15397-201ENSMUST00000145790 804 ntTSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm26100-201ENSMUST00000157245 127 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm23599-201ENSMUST00000157261 251 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm25572-201ENSMUST00000157527 172 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm23895-201ENSMUST00000158108 160 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm16055-201ENSMUST00000161366 626 ntTSL 2 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm7097-201ENSMUST00000161841 491 ntTSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AU040972-201ENSMUST00000165610 1042 ntTSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Obox4-ps35-201ENSMUST00000173825 680 ntTSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm21732-201ENSMUST00000179309 1083 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm21773-201ENSMUST00000179355 1083 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm21921-201ENSMUST00000180040 1083 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm20619-204ENSMUST00000181343 786 ntTSL 5 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Mir6971-201ENSMUST00000183497 63 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Mir3620-201ENSMUST00000184710 61 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm29315-201ENSMUST00000185844 622 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm29009-201ENSMUST00000186340 496 ntTSL 5 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm43096-201ENSMUST00000196173 421 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm34599-201ENSMUST00000198924 288 ntTSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm43384-201ENSMUST00000200569 637 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm44399-201ENSMUST00000205043 226 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm44520-201ENSMUST00000205447 802 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm30146-201ENSMUST00000206564 605 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC093926.1-201ENSMUST00000213730 243 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC174457.1-201ENSMUST00000215932 226 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm18228-201ENSMUST00000217297 1091 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC132465.3-201ENSMUST00000219326 195 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC123618.1-201ENSMUST00000220174 360 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC167977.1-201ENSMUST00000221384 234 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 AC132315.1-201ENSMUST00000221771 390 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm40598-201ENSMUST00000222953 547 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 CT573085.1-201ENSMUST00000224279 1197 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Olfr1193-201ENSMUST00000081697 957 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Mir132-201ENSMUST00000083603 66 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Gm43881-201ENSMUST00000203051 2530 ntBASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Olfr774-202ENSMUST00000203248 1429 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Zfp984-201ENSMUST00000105734 2729 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Clhc1-201ENSMUST00000020753 2200 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
RTRAFQ9CQE8 Olfr298-204ENSMUST00000217110 3549 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm37645-201ENSMUST00000194285 3556 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm14469-201ENSMUST00000118363 202 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm12891-201ENSMUST00000119358 240 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm23028-201ENSMUST00000158773 265 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Prl3d2-202ENSMUST00000164964 675 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Vmn1r-ps26-201ENSMUST00000174239 840 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm25026-201ENSMUST00000175017 188 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Vmn1r7-201ENSMUST00000176252 1219 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 4930505G20Rik-201ENSMUST00000176582 561 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Mir5123-201ENSMUST00000177794 83 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm27893-201ENSMUST00000184408 194 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm29460-201ENSMUST00000188607 714 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm20776-201ENSMUST00000189940 700 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm2861-201ENSMUST00000199885 666 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm43228-201ENSMUST00000200735 264 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 AC153506.2-201ENSMUST00000218051 257 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm19540-201ENSMUST00000221843 810 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Bcl2a1c-201ENSMUST00000066460 444 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm9174-201ENSMUST00000078149 255 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 D130040H23Rik-201ENSMUST00000078257 1218 ntTSL 2 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Olfr382-201ENSMUST00000092921 939 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm44708-201ENSMUST00000205580 2237 ntBASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Olfr1135-202ENSMUST00000213835 2648 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
RTRAFQ9CQE8 Gm43300-201ENSMUST00000198540 2043 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Mir542-201ENSMUST00000102186 85 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm24120-201ENSMUST00000103978 129 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm26341-201ENSMUST00000104561 134 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm2348-201ENSMUST00000108782 300 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm13087-201ENSMUST00000118298 256 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm11429-201ENSMUST00000119089 144 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm14463-201ENSMUST00000121117 498 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Nectin3-206ENSMUST00000121803 541 ntTSL 2 BASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Sycp3-203ENSMUST00000125612 1169 ntAPPRIS ALT2 TSL 1 (best) BASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm13752-201ENSMUST00000138195 491 ntTSL 5 BASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm14707-201ENSMUST00000152793 398 ntTSL 5 BASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm26088-201ENSMUST00000157896 131 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm13147-202ENSMUST00000177526 1173 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Mir3473f-201ENSMUST00000183743 136 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm27608-201ENSMUST00000184822 162 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Gm28314-201ENSMUST00000191276 345 ntBASIC2.3□□□□□ -2.04
RTRAFQ9CQE8 Igkv14-118-2-201ENSMUST00000198287 339 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 78.4 ms