Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Mir465b-1-201ENSMUST00000103940 79 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm24350-201ENSMUST00000104163 133 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm24235-201ENSMUST00000104319 129 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Mir465b-2-201ENSMUST00000104662 79 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm15760-201ENSMUST00000119553 283 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm15263-201ENSMUST00000121556 642 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm22026-201ENSMUST00000122735 281 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm22321-201ENSMUST00000157152 104 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm22447-201ENSMUST00000158155 92 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm25615-201ENSMUST00000177836 94 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm28385-201ENSMUST00000185671 292 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm7329-201ENSMUST00000185915 210 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm28148-201ENSMUST00000186924 697 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm37882-201ENSMUST00000195254 196 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm44319-201ENSMUST00000196974 93 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm44648-201ENSMUST00000208267 329 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 AC154846.2-201ENSMUST00000228805 424 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm26457-201ENSMUST00000082678 78 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm43130-201ENSMUST00000197721 3907 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm26853-201ENSMUST00000180757 4010 ntTSL 5 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Ktn1-224ENSMUST00000191018 4033 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Pcdh15-222ENSMUST00000147189 6806 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm37868-201ENSMUST00000195578 2735 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Vmn2r106-201ENSMUST00000167464 2589 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Gm44439-201ENSMUST00000203379 3592 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 6820402A03Rik-201ENSMUST00000194648 2654 ntBASIC5.5□□□□□ -1.53
Usp3Q91W36 Olfr198-202ENSMUST00000208244 2200 ntAPPRIS P1 TSL 2 BASIC5.5□□□□□ -1.53
Usp3Q91W36 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp3Q91W36 4930431P03Rik-202ENSMUST00000166127 4237 ntTSL 2 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Olfr191-202ENSMUST00000215647 3857 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Vmn2r75-201ENSMUST00000167830 2562 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp3Q91W36 C130079G13Rik-201ENSMUST00000049476 2789 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm22273-201ENSMUST00000104040 132 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm17160-201ENSMUST00000170645 260 ntTSL 3 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm5139-201ENSMUST00000175943 249 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Mir7020-201ENSMUST00000183787 70 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm29454-201ENSMUST00000190805 393 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm32391-201ENSMUST00000191839 540 ntTSL 2 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm37421-201ENSMUST00000193088 132 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm37617-201ENSMUST00000194309 159 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm32222-201ENSMUST00000203296 298 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm45215-201ENSMUST00000206407 395 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm44776-201ENSMUST00000207212 381 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 AC155715.1-201ENSMUST00000213575 463 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 AC153800.1-201ENSMUST00000219212 365 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm46367-202ENSMUST00000222771 501 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp3Q91W36 AC154626.1-201ENSMUST00000226070 311 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm6462-201ENSMUST00000081488 304 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Gm22062-201ENSMUST00000082563 107 ntBASIC5.49□□□□□ -1.53
Usp3Q91W36 Tbc1d32-201ENSMUST00000099739 7240 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Atr-213ENSMUST00000215311 8102 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Usp3Q91W36 E330016L19Rik-201ENSMUST00000140614 1959 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Usp3Q91W36 Gab3-203ENSMUST00000114109 2093 ntTSL 2 BASIC5.49□□□□□ -1.53
Usp3Q91W36 AC152414.1-201ENSMUST00000218784 2287 ntTSL 5 BASIC5.49□□□□□ -1.53
Usp3Q91W36 Rbm41-202ENSMUST00000087400 2229 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 A530083M17Rik-201ENSMUST00000199877 3376 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 AI987944-201ENSMUST00000071804 2671 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp3Q91W36 AC116797.2-201ENSMUST00000224763 4221 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Igkv6-17-201ENSMUST00000103391 377 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
Usp3Q91W36 Mir1188-201ENSMUST00000116756 120 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm15297-201ENSMUST00000117795 290 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm14770-201ENSMUST00000122197 312 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm25599-201ENSMUST00000157816 103 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm10087-201ENSMUST00000167650 330 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm42647-201ENSMUST00000195939 459 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm43828-201ENSMUST00000196890 639 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm19256-201ENSMUST00000218550 231 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 AC165953.1-201ENSMUST00000226386 357 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 AC164304.1-201ENSMUST00000226920 272 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 A630091E08Rik-201ENSMUST00000069035 828 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm22297-201ENSMUST00000083312 106 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm23138-201ENSMUST00000083365 103 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm43329-201ENSMUST00000200120 3232 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Olfr365-203ENSMUST00000218602 5374 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
Usp3Q91W36 Mbnl1-207ENSMUST00000192607 4552 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.48□□□□□ -1.53
Usp3Q91W36 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
Usp3Q91W36 Gm37779-201ENSMUST00000194221 3380 ntBASIC5.48□□□□□ -1.53
Usp3Q91W36 Olfr747-204ENSMUST00000213238 1416 ntAPPRIS P1 TSL 3 BASIC5.48□□□□□ -1.53
Usp3Q91W36 Ryr3-204ENSMUST00000134358 14958 ntAPPRIS ALT2 TSL 5 BASIC5.47□□□□□ -1.53
Usp3Q91W36 Mdm4-210ENSMUST00000188090 7105 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
Usp3Q91W36 Gm24429-201ENSMUST00000104076 132 ntBASIC5.47□□□□□ -1.53
Usp3Q91W36 Gm6829-201ENSMUST00000119858 360 ntBASIC5.47□□□□□ -1.53
Usp3Q91W36 Rpl12-ps2-201ENSMUST00000121298 321 ntBASIC5.47□□□□□ -1.53
Usp3Q91W36 Gm15905-201ENSMUST00000137042 298 ntBASIC5.47□□□□□ -1.53
Usp3Q91W36 Gm24477-201ENSMUST00000157438 103 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 89.6 ms