Protein–RNA interactions for Protein: Q8VC31

Ccdc9, Coiled-coil domain-containing protein 9, mousemouse

Known RBP Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc9Q8VC31 Gm24125-201ENSMUST00000104105 137 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Cd59b-204ENSMUST00000111132 436 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm609-201ENSMUST00000114585 2122 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm14365-201ENSMUST00000117535 587 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm14986-201ENSMUST00000121262 1002 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm23885-201ENSMUST00000122682 294 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 4930597A21Rik-201ENSMUST00000128652 698 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 4930451E10Rik-201ENSMUST00000130840 409 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Klra17-201ENSMUST00000014687 1190 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm23023-201ENSMUST00000158767 109 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm6395-201ENSMUST00000167639 691 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm21816-201ENSMUST00000179255 360 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Mir6975-201ENSMUST00000184879 61 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Mir6933-201ENSMUST00000184982 81 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm37193-201ENSMUST00000193087 513 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm37972-201ENSMUST00000193497 379 ntTSL 5 BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Rpl23a-ps5-201ENSMUST00000194566 466 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 4921527H02Rik-202ENSMUST00000196005 947 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm43228-201ENSMUST00000200735 264 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm44871-201ENSMUST00000207821 497 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm44852-201ENSMUST00000207950 369 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm18194-201ENSMUST00000210455 481 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 AC132384.9-201ENSMUST00000218085 277 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 AC174459.2-201ENSMUST00000226036 160 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Olfr891-201ENSMUST00000062535 951 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm24611-201ENSMUST00000083272 107 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm25512-201ENSMUST00000083863 107 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm10553-201ENSMUST00000097669 372 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm15697-201ENSMUST00000121946 2902 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Elavl2-208ENSMUST00000107120 4191 ntTSL 5 BASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Gm45872-201ENSMUST00000209804 1584 ntBASIC4.44□□□□□ -1.7
Ccdc9Q8VC31 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm22591-201ENSMUST00000104243 106 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Hnmt-202ENSMUST00000114497 994 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm14628-201ENSMUST00000117508 635 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Vmn1r-ps93-201ENSMUST00000117599 432 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm12102-201ENSMUST00000118251 604 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm14678-201ENSMUST00000121396 482 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm15263-201ENSMUST00000121556 642 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm22480-201ENSMUST00000122568 128 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm23167-201ENSMUST00000157155 103 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm25341-201ENSMUST00000157461 268 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm25908-201ENSMUST00000157624 98 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm25667-201ENSMUST00000157701 275 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm22789-201ENSMUST00000157884 130 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm4761-201ENSMUST00000178086 582 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm21737-201ENSMUST00000178112 664 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm20874-201ENSMUST00000178356 663 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm21744-201ENSMUST00000178403 662 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm20901-201ENSMUST00000180177 664 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm27834-201ENSMUST00000183427 125 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Mir6960-201ENSMUST00000183449 61 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm3454-201ENSMUST00000185571 412 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm28090-201ENSMUST00000189458 664 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm21647-201ENSMUST00000189755 664 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm33973-201ENSMUST00000195148 534 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Olfr428-ps1-201ENSMUST00000201135 466 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm44058-201ENSMUST00000204335 467 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm44472-201ENSMUST00000204922 943 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm31717-201ENSMUST00000213044 668 ntTSL 5 BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm18557-201ENSMUST00000218710 433 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 AC152951.1-201ENSMUST00000218907 266 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm10264-201ENSMUST00000220589 429 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 AC141642.1-201ENSMUST00000220598 229 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 AC160114.1-201ENSMUST00000221930 365 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 AC131747.1-201ENSMUST00000226159 793 ntBASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Olfr1033-205ENSMUST00000218397 3973 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
Ccdc9Q8VC31 Olfr609-203ENSMUST00000216360 3295 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Zfp37-202ENSMUST00000129511 1691 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Vmn2r-ps104-201ENSMUST00000099416 1671 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Olfr1216-202ENSMUST00000216000 3595 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm22493-201ENSMUST00000104494 132 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm14401-203ENSMUST00000108970 948 ntAPPRIS P1 TSL 3 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm15399-201ENSMUST00000118055 724 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm12954-201ENSMUST00000118610 611 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm14766-201ENSMUST00000121689 367 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm15367-201ENSMUST00000122398 1016 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm4724-203ENSMUST00000152941 1198 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm22841-201ENSMUST00000158443 62 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm17117-201ENSMUST00000163665 299 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm20648-201ENSMUST00000175815 328 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm21815-201ENSMUST00000178213 664 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 2310001H17Rik-201ENSMUST00000180379 521 ntTSL 2 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm18448-201ENSMUST00000186286 599 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm9989-202ENSMUST00000193125 258 ntTSL 3 BASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm18433-202ENSMUST00000195682 196 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm44438-201ENSMUST00000204388 3236 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm45226-201ENSMUST00000206602 288 ntBASIC4.42□□□□□ -1.7
Ccdc9Q8VC31 Gm45380-201ENSMUST00000210465 315 ntBASIC4.42□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 88.6 ms