Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm5268-201ENSMUST00000189212 940 ntBASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Gm37629-201ENSMUST00000193635 1050 ntBASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Gm44490-201ENSMUST00000198566 127 ntBASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Gm7039-201ENSMUST00000205138 346 ntBASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Gm19761-201ENSMUST00000205372 391 ntBASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Gm30674-201ENSMUST00000214523 392 ntBASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC1.87□□□□□ -2.11
Col6a6Q8C6K9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Olfr1293-ps-203ENSMUST00000217845 3628 ntAPPRIS P5 TSL 5 BASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm44789-201ENSMUST00000207195 3101 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm26080-201ENSMUST00000104069 131 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Mir466i-201ENSMUST00000116924 121 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm13755-201ENSMUST00000118509 305 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm23342-201ENSMUST00000158958 115 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Mir6352-201ENSMUST00000184495 116 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm28923-201ENSMUST00000187755 322 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm29475-201ENSMUST00000190767 312 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 AC117814.1-201ENSMUST00000226135 352 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 5930409G06Rik-201ENSMUST00000192347 1544 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm11253-201ENSMUST00000118486 201 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm14804-201ENSMUST00000122322 508 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 4930515L19Rik-201ENSMUST00000152352 769 ntTSL 1 (best) BASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm23467-201ENSMUST00000157127 159 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm24478-201ENSMUST00000157439 158 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm22093-201ENSMUST00000158980 111 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm16117-201ENSMUST00000160544 324 ntTSL 5 BASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Vmn2r-ps127-201ENSMUST00000175850 1029 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm18899-201ENSMUST00000217663 546 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 CT572983.1-201ENSMUST00000226895 514 ntBASIC1.86□□□□□ -2.11
Col6a6Q8C6K9 Gm43326-201ENSMUST00000198459 1638 ntBASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Olfr260-ps1-201ENSMUST00000117279 822 ntBASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Gm27753-201ENSMUST00000184742 203 ntBASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Olfr427-201ENSMUST00000080831 948 ntAPPRIS P1 BASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Olfr1177-ps-202ENSMUST00000216713 2821 ntAPPRIS P5 TSL 3 BASIC1.85□□□□□ -2.11
Col6a6Q8C6K9 Gm14877-201ENSMUST00000119803 478 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 n-R5s159-201ENSMUST00000122681 120 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 Gm22716-201ENSMUST00000177596 107 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 Gm18660-201ENSMUST00000199542 629 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 Gm19395-201ENSMUST00000219618 646 ntTSL 1 (best) BASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 AC154828.2-201ENSMUST00000220908 1070 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 AC239878.2-201ENSMUST00000224048 464 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 CT009713.4-201ENSMUST00000224246 272 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 AC115735.3-201ENSMUST00000227757 513 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 Vmn1r82-203ENSMUST00000227672 3651 ntBASIC1.84□□□□□ -2.11
Col6a6Q8C6K9 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 n-R5s52-201ENSMUST00000104614 113 ntBASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Mir290a-201ENSMUST00000104627 83 ntBASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Gm13595-201ENSMUST00000145994 494 ntTSL 3 BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Gm43676-201ENSMUST00000197532 540 ntBASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 AC117688.1-201ENSMUST00000213142 832 ntTSL 5 BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Gm18557-201ENSMUST00000218710 433 ntBASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r47-201ENSMUST00000074881 933 ntAPPRIS P1 BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Spink11-201ENSMUST00000097587 746 ntAPPRIS P1 TSL 1 (best) BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Homer1-205ENSMUST00000109492 1533 ntTSL 1 (best) BASIC1.84□□□□□ -2.12
Col6a6Q8C6K9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Olfr104-ps-202ENSMUST00000215398 2771 ntAPPRIS P5 TSL 5 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm3055-201ENSMUST00000105316 720 ntTSL 5 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm15244-201ENSMUST00000121122 130 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm22727-201ENSMUST00000158090 116 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Vmn2r-ps84-201ENSMUST00000173377 897 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Zfp781-201ENSMUST00000076281 732 ntAPPRIS P1 TSL 5 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Olfr501-ps1-201ENSMUST00000094105 946 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm21286-201ENSMUST00000098035 545 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Olfr1101-201ENSMUST00000099870 933 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Olfr1288-201ENSMUST00000104889 939 ntAPPRIS P1 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm14939-201ENSMUST00000120347 680 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm23599-201ENSMUST00000157261 251 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm24237-201ENSMUST00000157790 132 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm23179-201ENSMUST00000158693 304 ntBASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 9830004L10Rik-202ENSMUST00000188074 687 ntTSL 5 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC1.83□□□□□ -2.12
Col6a6Q8C6K9 Olfr810-202ENSMUST00000214206 4809 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm25832-201ENSMUST00000104140 130 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm15421-202ENSMUST00000118224 399 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm21990-201ENSMUST00000124692 383 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm12092-201ENSMUST00000125194 600 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm17929-201ENSMUST00000186851 627 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm23677-201ENSMUST00000083156 104 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Olfr1137-202ENSMUST00000214209 3073 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Olfr803-202ENSMUST00000204641 2385 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm14880-201ENSMUST00000117581 292 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm13771-201ENSMUST00000117988 238 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm13470-201ENSMUST00000123911 421 ntTSL 2 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Mir3968-201ENSMUST00000175355 100 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm42530-201ENSMUST00000202683 550 ntTSL 1 (best) BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Gm39388-201ENSMUST00000214502 1041 ntTSL 5 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 AC132384.11-201ENSMUST00000219676 178 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 A430103D13Rik-201ENSMUST00000220077 857 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 AC125350.4-201ENSMUST00000225895 273 ntBASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Tas2r130-201ENSMUST00000067597 1090 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Col6a6Q8C6K9 Olfr1351-201ENSMUST00000080730 960 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
Retrieved 100 of 76,532 protein–RNA pairs in 102.4 ms