Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm15553-201ENSMUST00000118757 430 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm14516-201ENSMUST00000120012 252 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm23171-201ENSMUST00000157159 264 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm23779-201ENSMUST00000157938 64 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm22839-201ENSMUST00000158436 304 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm23312-201ENSMUST00000158774 102 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm37670-201ENSMUST00000193622 229 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Nasp-ps1-201ENSMUST00000205050 691 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm7726-201ENSMUST00000206241 231 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm8745-201ENSMUST00000207846 782 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Olfr91-203ENSMUST00000217372 3809 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 n-R5s50-201ENSMUST00000083168 111 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Vmn1r71-204ENSMUST00000227702 5034 ntAPPRIS P2 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.18□□□□□ -1.58
Trim56Q80VI1 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC5.18□□□□□ -1.58
Trim56Q80VI1 Vmn1r217-202ENSMUST00000227110 9888 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Olfr1191-ps1-202ENSMUST00000217379 5933 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm14936-201ENSMUST00000137765 2621 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm45697-201ENSMUST00000212893 2876 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Rnf213-202ENSMUST00000131035 16716 ntAPPRIS P5 TSL 5 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm12760-201ENSMUST00000117861 482 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm11490-201ENSMUST00000118128 272 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm14013-201ENSMUST00000119006 270 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Hspe1-ps6-201ENSMUST00000120275 283 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm13232-201ENSMUST00000121816 632 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm14916-201ENSMUST00000121904 204 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm10444-201ENSMUST00000126708 148 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm25362-201ENSMUST00000158854 105 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm22395-201ENSMUST00000177427 96 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm24968-201ENSMUST00000179817 107 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm27402-201ENSMUST00000183890 120 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm27286-201ENSMUST00000184934 179 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm38076-201ENSMUST00000193889 450 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm42458-201ENSMUST00000201914 369 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm42665-201ENSMUST00000202100 586 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm35876-201ENSMUST00000205044 459 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm44879-201ENSMUST00000207007 503 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm45252-201ENSMUST00000211579 397 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Macc1-201ENSMUST00000048880 3818 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm10916-201ENSMUST00000080330 483 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm25401-201ENSMUST00000082975 106 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm23875-201ENSMUST00000083711 318 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm10324-201ENSMUST00000092528 1815 ntAPPRIS P1 TSL 5 BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Gm15084-201ENSMUST00000178585 1502 ntBASIC5.17□□□□□ -1.58
Trim56Q80VI1 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Trim56Q80VI1 Prrc2c-210ENSMUST00000182660 11502 ntAPPRIS P2 TSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Usp9x-201ENSMUST00000089302 11887 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Psg25-201ENSMUST00000094795 3109 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm15426-201ENSMUST00000117823 556 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm12646-201ENSMUST00000119144 238 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm15106-201ENSMUST00000119691 821 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm14100-201ENSMUST00000125575 651 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm14978-201ENSMUST00000129000 304 ntTSL 3 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm13173-201ENSMUST00000151703 441 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm11007-201ENSMUST00000177700 195 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm2007-201ENSMUST00000177981 195 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm2004-203ENSMUST00000179349 195 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm27611-201ENSMUST00000184690 108 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm27694-201ENSMUST00000184740 86 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm28654-201ENSMUST00000189801 379 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm2719-201ENSMUST00000191929 444 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm38150-201ENSMUST00000192996 452 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Hcfc1r1-ps2-201ENSMUST00000199379 339 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm44016-201ENSMUST00000203463 164 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm44336-201ENSMUST00000203696 468 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm45119-201ENSMUST00000207612 199 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm5373-201ENSMUST00000212113 1050 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm9318-201ENSMUST00000222444 438 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 AC154603.1-201ENSMUST00000224355 313 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 AC130536.1-201ENSMUST00000224425 271 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 AC144819.1-201ENSMUST00000227015 620 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm26447-201ENSMUST00000082448 129 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm24042-201ENSMUST00000083114 103 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm22577-201ENSMUST00000083731 109 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm38235-201ENSMUST00000194600 4952 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm43166-201ENSMUST00000202871 4379 ntTSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm4855-201ENSMUST00000192270 1967 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm381-201ENSMUST00000117443 2037 ntBASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm27162-201ENSMUST00000185169 2478 ntTSL 2 BASIC5.16□□□□□ -1.58
Trim56Q80VI1 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms