Protein–RNA interactions for Protein: Q6QIY3

Scn10a, Sodium channel protein type 10 subunit alpha, mousemouse

Predictions only

Length 1,958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn10aQ6QIY3 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Vmn1r28-201ENSMUST00000226813 10877 ntAPPRIS P1 BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm23942-201ENSMUST00000101956 107 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 n-R5s52-201ENSMUST00000104614 113 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm12213-201ENSMUST00000119924 353 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm24177-201ENSMUST00000158927 131 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm23633-201ENSMUST00000175293 119 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm27470-201ENSMUST00000184070 210 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Mir3569-201ENSMUST00000185080 58 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 BE692007-201ENSMUST00000186054 954 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm5268-201ENSMUST00000189212 940 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm29023-201ENSMUST00000190543 325 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm37579-201ENSMUST00000194291 142 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 4930448F12Rik-201ENSMUST00000220795 859 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 AC167192.4-201ENSMUST00000224087 993 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 AC134335.1-201ENSMUST00000227626 329 ntBASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Tug1-201ENSMUST00000132077 6719 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
Scn10aQ6QIY3 Gm42483-201ENSMUST00000197556 1742 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Mc2r-201ENSMUST00000052347 1562 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Olfr821-202ENSMUST00000205181 1993 ntAPPRIS P1 TSL 2 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Rpl23a-ps6-201ENSMUST00000119466 468 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm7846-201ENSMUST00000145844 274 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm12510-201ENSMUST00000152190 362 ntTSL 5 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 1700029B22Rik-202ENSMUST00000186532 694 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 4930554C24Rik-201ENSMUST00000187735 1084 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm29215-202ENSMUST00000188659 621 ntTSL 5 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm35070-201ENSMUST00000192589 621 ntTSL 5 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm7182-201ENSMUST00000193351 732 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm30686-202ENSMUST00000195371 621 ntTSL 5 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 AC140381.1-201ENSMUST00000219168 367 ntTSL 2 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 AC192334.1-201ENSMUST00000221832 1268 ntTSL 5 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Naaladl2-202ENSMUST00000203414 9330 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm6207-201ENSMUST00000120075 1386 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm6228-201ENSMUST00000178856 1386 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm36962-201ENSMUST00000192114 1761 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Gm44230-201ENSMUST00000203032 3550 ntBASIC2.68□□□□□ -1.98
Scn10aQ6QIY3 Mir693-201ENSMUST00000102187 89 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm12898-201ENSMUST00000144407 642 ntTSL 3 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 4933430M04Rik-201ENSMUST00000152726 744 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm24771-201ENSMUST00000158508 137 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Igkv13-71-1-201ENSMUST00000199934 264 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm18453-201ENSMUST00000208000 626 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 AC122465.3-201ENSMUST00000221644 355 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 CT030166.1-201ENSMUST00000222654 357 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 AC124400.1-201ENSMUST00000225779 193 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Olfr385-201ENSMUST00000071553 939 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm15975-201ENSMUST00000122385 1402 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Olfr1471-204ENSMUST00000217249 1662 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm24096-201ENSMUST00000103905 110 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm26277-201ENSMUST00000157097 152 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 RMST_1.1-201ENSMUST00000182623 407 ntTSL 2 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm27443-201ENSMUST00000184660 98 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm19257-201ENSMUST00000186121 183 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 AC153975.1-201ENSMUST00000220087 926 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Olfr1469-201ENSMUST00000077538 930 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Gm22806-201ENSMUST00000082738 136 ntBASIC2.67□□□□□ -1.98
Scn10aQ6QIY3 Trav20-201ENSMUST00000142754 347 ntBASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Gm24010-201ENSMUST00000157731 282 ntBASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Gm9251-201ENSMUST00000197202 628 ntBASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Gm45063-201ENSMUST00000203726 472 ntBASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Vmn1r17-202ENSMUST00000227966 912 ntAPPRIS P2 BASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Macf1-203ENSMUST00000097897 23495 ntAPPRIS P2 TSL 1 (best) BASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Gm12580-201ENSMUST00000127456 1751 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
Scn10aQ6QIY3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 n-R5s164-201ENSMUST00000122664 112 ntBASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 Gm22036-201ENSMUST00000157279 215 ntBASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 Gm42947-201ENSMUST00000198230 675 ntTSL 2 BASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 Gm29926-201ENSMUST00000201443 660 ntTSL 3 BASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 4930567K20Rik-203ENSMUST00000220108 646 ntTSL 5 BASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 Olfr1140-203ENSMUST00000217572 1327 ntAPPRIS P1 BASIC2.65□□□□□ -1.98
Scn10aQ6QIY3 Olfr801-203ENSMUST00000213294 4045 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Mir542-201ENSMUST00000102186 85 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Gm16561-201ENSMUST00000163001 192 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Gm17711-201ENSMUST00000172028 237 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Tspy-ps-202ENSMUST00000172304 321 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Gm24811-201ENSMUST00000175313 100 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Mir6393-201ENSMUST00000183709 94 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Mir7225-201ENSMUST00000184178 54 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 1700006F04Rik-201ENSMUST00000188582 441 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Gm38216-201ENSMUST00000194872 1214 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Gm7588-201ENSMUST00000216866 571 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 AC158631.1-201ENSMUST00000219202 138 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 CT030135.1-201ENSMUST00000223760 570 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 AC124104.1-201ENSMUST00000226279 417 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Olfr1137-201ENSMUST00000099850 933 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 BC051076-202ENSMUST00000199477 2868 ntBASIC2.65□□□□□ -1.99
Scn10aQ6QIY3 Gm37303-201ENSMUST00000194202 1559 ntBASIC2.64□□□□□ -1.99
Scn10aQ6QIY3 Vmn1r80-205ENSMUST00000227755 10455 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Retrieved 100 of 76,532 protein–RNA pairs in 83 ms