Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm29014-201ENSMUST00000191422 326 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm9134-201ENSMUST00000193186 551 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm4714-201ENSMUST00000203395 279 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm44016-201ENSMUST00000203463 164 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr1315-ps1-202ENSMUST00000208654 945 ntAPPRIS ALT1 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm8940-201ENSMUST00000212585 219 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 AC125374.2-201ENSMUST00000214278 162 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 AC154840.1-201ENSMUST00000225216 408 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm25801-201ENSMUST00000082638 106 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Mir99a-201ENSMUST00000083596 65 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Olfr1316-201ENSMUST00000099596 945 ntAPPRIS P2 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Pgap1-201ENSMUST00000097739 10583 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Postn-201ENSMUST00000073012 3189 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Gm31747-201ENSMUST00000204638 3086 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 AC113059.2-201ENSMUST00000213462 3016 ntBASIC4.84□□□□□ -1.63
Sh3rf1Q69ZI1 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 2700016F22Rik-201ENSMUST00000181556 3605 ntTSL 1 (best) BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 AC126439.1-201ENSMUST00000226772 2104 ntBASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Gpr141-201ENSMUST00000065335 3433 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Slco1a1-201ENSMUST00000042119 3395 ntAPPRIS P2 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Fam169a-202ENSMUST00000169863 6013 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Sh3rf1Q69ZI1 Xrn1-209ENSMUST00000190665 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Dync2h1-201ENSMUST00000048417 13972 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1217-203ENSMUST00000214022 3947 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Slco1a5-201ENSMUST00000081380 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr50-202ENSMUST00000216753 4531 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1109-202ENSMUST00000214636 2483 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Dbpht2-202ENSMUST00000221311 5341 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr516-203ENSMUST00000217279 1441 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 AC160931.3-201ENSMUST00000222111 2267 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Mir676-201ENSMUST00000102443 89 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25915-201ENSMUST00000104265 126 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm15951-201ENSMUST00000118377 400 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Smt3h2-ps4-201ENSMUST00000121569 288 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm22345-201ENSMUST00000122644 107 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25058-201ENSMUST00000157365 128 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm25666-201ENSMUST00000157702 107 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm21797-201ENSMUST00000177579 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm23725-201ENSMUST00000177876 107 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm21767-201ENSMUST00000178689 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm21822-201ENSMUST00000179302 543 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm27410-201ENSMUST00000183851 115 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm29484-201ENSMUST00000186067 324 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 4930503O07Rik-201ENSMUST00000193395 578 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Ighv1-6-201ENSMUST00000193849 293 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Rnu3a-202ENSMUST00000196710 213 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm5552-201ENSMUST00000197149 515 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Jakmip1-216ENSMUST00000212997 138 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm19790-201ENSMUST00000214414 251 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 AC158803.3-201ENSMUST00000220024 211 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 AC130222.1-201ENSMUST00000221198 256 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 AC154576.1-201ENSMUST00000225864 563 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 2010005H15Rik-201ENSMUST00000063539 294 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr786-201ENSMUST00000076508 939 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm23645-201ENSMUST00000083228 108 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Rnu3a-201ENSMUST00000083936 214 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37562-201ENSMUST00000194763 4328 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Rapgef4-201ENSMUST00000028525 4109 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Cp-203ENSMUST00000108325 3183 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1014-202ENSMUST00000213453 2447 ntAPPRIS P1 TSL 3 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm5362-201ENSMUST00000211968 3085 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr1265-202ENSMUST00000214855 5701 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 AC121598.3-201ENSMUST00000227179 1643 ntBASIC4.83□□□□□ -1.64
Sh3rf1Q69ZI1 Gm2123-201ENSMUST00000221476 2836 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm15356-201ENSMUST00000140669 2741 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Cyp3a57-201ENSMUST00000079268 1986 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr291-202ENSMUST00000217039 3471 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Vmn1r217-203ENSMUST00000228656 9767 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Traj2-201ENSMUST00000103738 66 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm12509-201ENSMUST00000118033 609 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm8145-201ENSMUST00000118220 745 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm12328-201ENSMUST00000118611 197 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm22433-201ENSMUST00000158550 142 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Obox4-ps6-201ENSMUST00000176578 724 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm23966-201ENSMUST00000179823 107 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Snhg14-201ENSMUST00000185272 726 ntTSL 5 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm28163-201ENSMUST00000187099 325 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm29668-201ENSMUST00000187802 315 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm5368-201ENSMUST00000189012 589 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm37568-201ENSMUST00000191755 364 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm44481-201ENSMUST00000197288 84 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm44339-201ENSMUST00000200598 84 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm44941-201ENSMUST00000204216 627 ntTSL 2 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 Gm32443-202ENSMUST00000220011 773 ntTSL 5 BASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 AC099578.1-201ENSMUST00000220147 435 ntBASIC4.82□□□□□ -1.64
Sh3rf1Q69ZI1 AC159203.2-201ENSMUST00000221326 193 ntBASIC4.82□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 136.9 ms