Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Ptma-ps1-201ENSMUST00000181079 309 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm28058-201ENSMUST00000186421 264 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm28629-201ENSMUST00000187309 263 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm42990-201ENSMUST00000199231 312 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm44857-201ENSMUST00000208331 196 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm45366-201ENSMUST00000209828 384 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 CAAA01216754.4-202ENSMUST00000215276 610 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 AC147240.1-201ENSMUST00000218767 431 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 CT010506.3-201ENSMUST00000223699 410 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 AC124433.2-201ENSMUST00000223867 291 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm23093-201ENSMUST00000083450 102 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim28Q62318 Olfr1369-ps1-203ENSMUST00000213922 3930 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Trim28Q62318 Olfr1368-202ENSMUST00000216039 1389 ntAPPRIS P1 TSL 3 BASIC4.87□□□□□ -1.63
Trim28Q62318 Txndc9-204ENSMUST00000193832 3472 ntTSL 2 BASIC4.87□□□□□ -1.63
Trim28Q62318 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.87□□□□□ -1.63
Trim28Q62318 Zfp945-205ENSMUST00000160457 6497 ntAPPRIS P4 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 Zfp788-201ENSMUST00000045720 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 Nlrp9a-204ENSMUST00000122040 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 Ighv1-4-201ENSMUST00000103493 351 ntAPPRIS P1 BASIC4.86□□□□□ -1.63
Trim28Q62318 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.86□□□□□ -1.63
Trim28Q62318 Gm22073-201ENSMUST00000122668 189 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Gm25294-201ENSMUST00000122791 104 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Grip1os2-201ENSMUST00000153898 722 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 Gm22842-201ENSMUST00000157709 118 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Ear-ps7-201ENSMUST00000161287 442 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Gm27640-201ENSMUST00000184580 147 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Gm18667-201ENSMUST00000186523 484 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 1700063O14Rik-201ENSMUST00000187067 492 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 2610306O10Rik-201ENSMUST00000206512 612 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Olfr1035-ps1-202ENSMUST00000213364 288 ntTSL 5 BASIC4.86□□□□□ -1.63
Trim28Q62318 Gm2436-201ENSMUST00000219562 774 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 AC122905.2-201ENSMUST00000220325 269 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Gm7753-201ENSMUST00000221007 867 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 CT009713.4-201ENSMUST00000224246 272 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 CT009711.3-201ENSMUST00000225882 250 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 n-R5s37-201ENSMUST00000082533 118 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Olfr1263-204ENSMUST00000217065 4186 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Trim28Q62318 Gm37903-201ENSMUST00000192122 2381 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Gm38388-201ENSMUST00000195569 1430 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Gm44283-201ENSMUST00000204461 3950 ntBASIC4.86□□□□□ -1.63
Trim28Q62318 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Trim28Q62318 AC147615.2-201ENSMUST00000219876 2154 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Olfr351-202ENSMUST00000213676 3426 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm23697-201ENSMUST00000103897 110 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm24403-201ENSMUST00000104616 130 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm14586-201ENSMUST00000119571 408 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm14159-201ENSMUST00000119832 451 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Ifna-ps1-201ENSMUST00000119856 555 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm12543-201ENSMUST00000120410 543 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm24059-201ENSMUST00000157493 312 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm25572-201ENSMUST00000157527 172 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm25335-201ENSMUST00000158043 103 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm20794-201ENSMUST00000177626 628 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm23141-201ENSMUST00000178682 94 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Mir6938-201ENSMUST00000184173 63 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm29139-201ENSMUST00000185794 248 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm28148-201ENSMUST00000186924 697 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm36891-201ENSMUST00000191995 655 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm37253-201ENSMUST00000195679 562 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm42458-201ENSMUST00000201914 369 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 4930556N09Rik-202ENSMUST00000219466 1015 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim28Q62318 AC130536.1-201ENSMUST00000224425 271 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
Trim28Q62318 Tenm1-203ENSMUST00000115059 12879 ntAPPRIS P2 TSL 1 (best) BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm37652-201ENSMUST00000195290 2095 ntBASIC4.85□□□□□ -1.63
Trim28Q62318 Ndst4-204ENSMUST00000173932 7417 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Olfr1317-203ENSMUST00000214801 2578 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Olfr1438-ps1-201ENSMUST00000208398 4761 ntAPPRIS P1 TSL 5 BASIC4.85□□□□□ -1.63
Trim28Q62318 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.84□□□□□ -1.63
Trim28Q62318 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Trim28Q62318 Olfr818-203ENSMUST00000215527 1849 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.63
Trim28Q62318 Gm18432-201ENSMUST00000195568 1451 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Olfr393-201ENSMUST00000102523 939 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Trim28Q62318 Gm24683-201ENSMUST00000104840 88 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm14050-201ENSMUST00000117052 346 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm6923-201ENSMUST00000118343 406 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm15113-201ENSMUST00000119280 836 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm11890-201ENSMUST00000119585 417 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm8244-201ENSMUST00000121254 264 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC4.84□□□□□ -1.63
Trim28Q62318 Ear-ps12-201ENSMUST00000161720 451 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm25874-201ENSMUST00000178030 79 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm26983-201ENSMUST00000182051 388 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm28141-201ENSMUST00000186676 342 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm28151-201ENSMUST00000189404 951 ntBASIC4.84□□□□□ -1.63
Trim28Q62318 Gm21088-201ENSMUST00000190875 316 ntBASIC4.84□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 84.3 ms