Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Vmn1r66-203ENSMUST00000227719 2765 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
Six3Q62233 Gm24987-201ENSMUST00000104453 134 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm15988-201ENSMUST00000118677 367 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm11829-201ENSMUST00000121003 282 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm26424-201ENSMUST00000122530 104 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm12730-201ENSMUST00000125277 291 ntTSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 Oosp2-202ENSMUST00000135994 453 ntAPPRIS ALT2 TSL 3 BASIC3.26□□□□□ -1.89
Six3Q62233 Zfp965-204ENSMUST00000143490 297 ntTSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 Gm6374-201ENSMUST00000159051 788 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm3221-201ENSMUST00000164869 440 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm17054-201ENSMUST00000169811 259 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Zfp950-206ENSMUST00000178819 171 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 Gm44282-201ENSMUST00000203199 190 ntBASIC3.26□□□□□ -1.89
Six3Q62233 4930595L18Rik-201ENSMUST00000204069 506 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Six3Q62233 Gm36159-201ENSMUST00000206737 549 ntTSL 3 BASIC3.26□□□□□ -1.89
Six3Q62233 Gm19137-201ENSMUST00000213790 1164 ntBASIC3.26□□□□□ -1.89
Six3Q62233 AC192616.3-201ENSMUST00000220797 1124 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Six3Q62233 AC133498.1-206ENSMUST00000223254 385 ntTSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 AC115291.2-201ENSMUST00000228335 437 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Defb33-201ENSMUST00000098908 424 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
Six3Q62233 4930533N22Rik-201ENSMUST00000206433 3509 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
Six3Q62233 Ccr3-201ENSMUST00000039171 3272 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
Six3Q62233 Gm15902-202ENSMUST00000219623 3477 ntBASIC3.26□□□□□ -1.89
Six3Q62233 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 Macc1-203ENSMUST00000221917 4272 ntAPPRIS P1 TSL 5 BASIC3.26□□□□□ -1.89
Six3Q62233 Gm43486-201ENSMUST00000196431 4339 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Vmn2r23-201ENSMUST00000172391 2602 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Pkhd1l1-202ENSMUST00000166957 12747 ntTSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Pkhd1l1-201ENSMUST00000038336 12741 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 Olfr1404-202ENSMUST00000216556 3305 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Olfr346-202ENSMUST00000213258 4104 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Gm43268-201ENSMUST00000201536 4055 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Fbxw16-201ENSMUST00000084984 1497 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 Trav16-201ENSMUST00000103667 420 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Six3Q62233 Traj12-201ENSMUST00000103729 58 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
Six3Q62233 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 Celf2-203ENSMUST00000114923 529 ntTSL 3 BASIC3.25□□□□□ -1.89
Six3Q62233 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Rps15a-ps3-201ENSMUST00000121072 395 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm13686-201ENSMUST00000122851 350 ntTSL 3 BASIC3.25□□□□□ -1.89
Six3Q62233 1700013N06Rik-201ENSMUST00000156376 663 ntTSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Gm23755-201ENSMUST00000157578 343 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm24241-201ENSMUST00000157787 145 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm22766-201ENSMUST00000158372 99 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm10075-201ENSMUST00000162030 545 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm2930-201ENSMUST00000170403 474 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm17183-201ENSMUST00000171170 493 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Pcgf1-204ENSMUST00000176089 492 ntTSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Gm23145-201ENSMUST00000178912 79 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm27648-201ENSMUST00000184315 107 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm28666-201ENSMUST00000186649 274 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm28785-201ENSMUST00000187478 379 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm28802-201ENSMUST00000188624 944 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm29423-207ENSMUST00000189580 255 ntAPPRIS ALT2 TSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Gm38075-201ENSMUST00000191979 920 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm18956-201ENSMUST00000192857 480 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm44050-201ENSMUST00000204263 527 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm34701-202ENSMUST00000204685 360 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm34779-201ENSMUST00000210036 263 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm29817-201ENSMUST00000210098 172 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm7380-201ENSMUST00000211599 466 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm34158-201ENSMUST00000216390 567 ntTSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 Olfr27-202ENSMUST00000216405 1125 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 AC132465.3-201ENSMUST00000219326 195 ntBASIC3.25□□□□□ -1.89
Six3Q62233 AC144942.1-201ENSMUST00000220425 597 ntTSL 5 BASIC3.25□□□□□ -1.89
Six3Q62233 AC159239.1-201ENSMUST00000221767 603 ntTSL 3 BASIC3.25□□□□□ -1.89
Six3Q62233 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 Sprr2i-201ENSMUST00000047264 617 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 1700020N15Rik-201ENSMUST00000075654 525 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 Gm4987-201ENSMUST00000078326 408 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm23932-201ENSMUST00000082914 107 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Mir132-201ENSMUST00000083603 66 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Vdac3-ps1-201ENSMUST00000099736 853 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Gm9911-201ENSMUST00000211467 2802 ntBASIC3.25□□□□□ -1.89
Six3Q62233 Mannr-201ENSMUST00000193549 1438 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 5330434G04Rik-203ENSMUST00000142109 3449 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
Six3Q62233 D3Ertd254e-201ENSMUST00000165956 6503 ntTSL 3 BASIC3.25□□□□□ -1.89
Six3Q62233 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Six3Q62233 Gm37158-201ENSMUST00000191652 5704 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Igkv4-57-201ENSMUST00000103357 352 ntAPPRIS P1 BASIC3.24□□□□□ -1.89
Six3Q62233 Gm15060-201ENSMUST00000119550 948 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm2318-201ENSMUST00000119623 639 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm15177-201ENSMUST00000120491 577 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm15142-201ENSMUST00000121013 856 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm2768-201ENSMUST00000121062 250 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm12095-201ENSMUST00000121962 816 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm24914-201ENSMUST00000157285 313 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm23540-201ENSMUST00000157543 164 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm25902-201ENSMUST00000158493 318 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Ear-ps10-201ENSMUST00000161871 460 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm3102-201ENSMUST00000164236 489 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm3298-201ENSMUST00000165289 516 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
Six3Q62233 Gm8206-202ENSMUST00000168733 516 ntAPPRIS P1 TSL 5 BASIC3.24□□□□□ -1.89
Six3Q62233 Gm23053-201ENSMUST00000175136 96 ntBASIC3.24□□□□□ -1.89
Six3Q62233 Gm7438-201ENSMUST00000177664 639 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 76,532 protein–RNA pairs in 84.7 ms