Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Pih1h3b-201ENSMUST00000044806 1509 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
Ctr9Q62018 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
Ctr9Q62018 Gm43300-201ENSMUST00000198540 2043 ntBASIC3.68□□□□□ -1.82
Ctr9Q62018 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm37402-201ENSMUST00000194525 5000 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm7308-201ENSMUST00000121087 447 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm16331-201ENSMUST00000144274 498 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm22322-201ENSMUST00000157151 111 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm22187-201ENSMUST00000157819 129 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm24190-201ENSMUST00000157976 216 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm18520-201ENSMUST00000174783 658 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Rpl23a-ps8-201ENSMUST00000186144 463 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm37213-201ENSMUST00000193077 586 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm34091-201ENSMUST00000200875 604 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm18410-201ENSMUST00000207199 577 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm34838-201ENSMUST00000209231 958 ntTSL 5 BASIC3.67□□□□□ -1.82
Ctr9Q62018 AC154552.5-201ENSMUST00000222352 207 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 AC239878.1-201ENSMUST00000224212 506 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 AC132881.2-201ENSMUST00000225474 709 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 AC090496.1-201ENSMUST00000226020 260 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ctr9Q62018 Mir421-201ENSMUST00000083575 76 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
Ctr9Q62018 Arl13a-201ENSMUST00000064476 1740 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
Ctr9Q62018 Gm42675-201ENSMUST00000197552 4035 ntBASIC3.67□□□□□ -1.82
Ctr9Q62018 Olfr1226-202ENSMUST00000214709 5270 ntAPPRIS P1 TSL 3 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Vmn1r30-203ENSMUST00000227466 1798 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Fbxw21-201ENSMUST00000054925 1512 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm13574-201ENSMUST00000120482 394 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm12729-201ENSMUST00000130088 624 ntTSL 3 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm3221-201ENSMUST00000164869 440 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm21962-201ENSMUST00000166899 1017 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm2930-201ENSMUST00000170403 474 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm26297-201ENSMUST00000179464 132 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm42476-201ENSMUST00000198860 554 ntTSL 3 BASIC3.66□□□□□ -1.82
Ctr9Q62018 4930598N05Rik-205ENSMUST00000208693 873 ntTSL 1 (best) BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm45571-201ENSMUST00000209671 569 ntTSL 5 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm35262-201ENSMUST00000215133 267 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm18729-201ENSMUST00000217230 621 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 AC156952.1-201ENSMUST00000220361 793 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 AC168059.2-201ENSMUST00000224473 333 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 AC126275.1-201ENSMUST00000224881 446 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 AC102575.1-201ENSMUST00000225348 547 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Stfa1-201ENSMUST00000042097 418 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ctr9Q62018 1110032A03Rik-202ENSMUST00000042576 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ctr9Q62018 Defb19-201ENSMUST00000053180 394 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ctr9Q62018 Olfr773-201ENSMUST00000072976 936 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Tas2r106-201ENSMUST00000076756 927 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Olfr52-201ENSMUST00000099905 960 ntAPPRIS P1 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm6757-201ENSMUST00000189810 1706 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Mcmdc2-203ENSMUST00000125294 2003 ntTSL 5 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Olfr1484-205ENSMUST00000216369 3764 ntTSL 5 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm44708-201ENSMUST00000205580 2237 ntBASIC3.66□□□□□ -1.82
Ctr9Q62018 Olfr924-202ENSMUST00000217350 3431 ntAPPRIS P1 TSL 5 BASIC3.66□□□□□ -1.82
Ctr9Q62018 Gm42870-201ENSMUST00000199355 3470 ntBASIC3.65□□□□□ -1.82
Ctr9Q62018 Gm7905-201ENSMUST00000119933 1386 ntBASIC3.65□□□□□ -1.82
Ctr9Q62018 Gm6221-201ENSMUST00000180064 1386 ntBASIC3.65□□□□□ -1.82
Ctr9Q62018 4930595M18Rik-201ENSMUST00000080083 2644 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.82
Ctr9Q62018 Olfr1168-202ENSMUST00000215996 2322 ntAPPRIS P1 TSL 3 BASIC3.65□□□□□ -1.82
Ctr9Q62018 Olfr1104-202ENSMUST00000214857 2693 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.82
Ctr9Q62018 Gm43404-201ENSMUST00000200424 2534 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Olfr1183-201ENSMUST00000102618 912 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm13603-201ENSMUST00000119404 83 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm9043-201ENSMUST00000119677 314 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm12495-201ENSMUST00000119750 447 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm16412-201ENSMUST00000121602 273 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm23111-201ENSMUST00000122652 105 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm22985-201ENSMUST00000122754 116 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm12478-201ENSMUST00000127709 353 ntTSL 5 BASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm16274-201ENSMUST00000139251 592 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm24198-201ENSMUST00000157812 108 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm25066-201ENSMUST00000158145 123 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm25413-201ENSMUST00000158544 312 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm10177-202ENSMUST00000161698 207 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Cfap54-204ENSMUST00000164979 945 ntTSL 5 BASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm18358-201ENSMUST00000173179 1277 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm18667-201ENSMUST00000186523 484 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm29602-201ENSMUST00000186887 442 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm28358-202ENSMUST00000189292 223 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm42438-201ENSMUST00000197832 974 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Mir3073b-201ENSMUST00000199383 60 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm43004-201ENSMUST00000201872 703 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm11213-202ENSMUST00000210529 524 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ctr9Q62018 Olfr1091-ps1-201ENSMUST00000216676 595 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm7540-201ENSMUST00000219764 926 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 AC154552.4-201ENSMUST00000222171 151 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 AC116395.1-201ENSMUST00000225480 1143 ntBASIC3.65□□□□□ -1.83
Ctr9Q62018 Ak6-202ENSMUST00000084721 1222 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ctr9Q62018 Olfr1216-203ENSMUST00000217000 3667 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ctr9Q62018 Vmn2r49-201ENSMUST00000108550 2559 ntAPPRIS P1 TSL 1 (best) BASIC3.65□□□□□ -1.83
Ctr9Q62018 Vmn2r47-201ENSMUST00000170131 2559 ntAPPRIS P1 TSL 5 BASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm816-201ENSMUST00000191156 2456 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
Ctr9Q62018 Ctdspl2-202ENSMUST00000110572 4160 ntTSL 5 BASIC3.65□□□□□ -1.83
Ctr9Q62018 Gm2042-201ENSMUST00000110145 1894 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ctr9Q62018 Dmd-203ENSMUST00000114000 14910 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ctr9Q62018 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Ctr9Q62018 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 82.1 ms